Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
PGBD3Q8N328 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
PGBD3Q8N328 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PGBD3Q8N328 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PGBD3Q8N328 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
PGBD3Q8N328 MIR4787-201ENST00000607364 84 ntBASIC24.28■■□□□ 1.48
PGBD3Q8N328 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.28■■□□□ 1.48
PGBD3Q8N328 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PGBD3Q8N328 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PGBD3Q8N328 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PGBD3Q8N328 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
PGBD3Q8N328 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PGBD3Q8N328 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PGBD3Q8N328 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PGBD3Q8N328 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.27■■□□□ 1.48
PGBD3Q8N328 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PGBD3Q8N328 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PGBD3Q8N328 AC008406.3-201ENST00000620001 1374 ntBASIC24.27■■□□□ 1.48
PGBD3Q8N328 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PGBD3Q8N328 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PGBD3Q8N328 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PGBD3Q8N328 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
PGBD3Q8N328 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PGBD3Q8N328 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PGBD3Q8N328 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
PGBD3Q8N328 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.26■■□□□ 1.47
PGBD3Q8N328 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
PGBD3Q8N328 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
PGBD3Q8N328 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.25■■□□□ 1.47
PGBD3Q8N328 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PGBD3Q8N328 BX255925.1-201ENST00000566954 1854 ntBASIC24.24■■□□□ 1.47
PGBD3Q8N328 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PGBD3Q8N328 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
PGBD3Q8N328 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.24■■□□□ 1.47
PGBD3Q8N328 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PGBD3Q8N328 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.23■■□□□ 1.47
PGBD3Q8N328 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
PGBD3Q8N328 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PGBD3Q8N328 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PGBD3Q8N328 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PGBD3Q8N328 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PGBD3Q8N328 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PGBD3Q8N328 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
PGBD3Q8N328 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PGBD3Q8N328 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PGBD3Q8N328 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PGBD3Q8N328 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PGBD3Q8N328 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PGBD3Q8N328 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PGBD3Q8N328 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.22■■□□□ 1.47
PGBD3Q8N328 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.22■■□□□ 1.47
PGBD3Q8N328 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PGBD3Q8N328 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PGBD3Q8N328 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PGBD3Q8N328 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.21■■□□□ 1.47
PGBD3Q8N328 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PGBD3Q8N328 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PGBD3Q8N328 KRT18P24-201ENST00000344739 1156 ntBASIC24.21■■□□□ 1.47
PGBD3Q8N328 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PGBD3Q8N328 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PGBD3Q8N328 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
PGBD3Q8N328 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.2■■□□□ 1.47
PGBD3Q8N328 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PGBD3Q8N328 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PGBD3Q8N328 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
PGBD3Q8N328 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PGBD3Q8N328 KRT16P3-201ENST00000439127 1283 ntBASIC24.19■■□□□ 1.46
PGBD3Q8N328 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.19■■□□□ 1.46
PGBD3Q8N328 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.19■■□□□ 1.46
PGBD3Q8N328 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PGBD3Q8N328 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.19■■□□□ 1.46
PGBD3Q8N328 AC142472.1-201ENST00000612013 1741 ntBASIC24.18■■□□□ 1.46
PGBD3Q8N328 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.18■■□□□ 1.46
PGBD3Q8N328 TSPY9P-201ENST00000440215 945 ntBASIC24.18■■□□□ 1.46
PGBD3Q8N328 TSPY11P-201ENST00000442607 1045 ntBASIC24.18■■□□□ 1.46
PGBD3Q8N328 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.18■■□□□ 1.46
PGBD3Q8N328 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.18■■□□□ 1.46
PGBD3Q8N328 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PGBD3Q8N328 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PGBD3Q8N328 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
PGBD3Q8N328 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PGBD3Q8N328 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
PGBD3Q8N328 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PGBD3Q8N328 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
PGBD3Q8N328 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PGBD3Q8N328 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.16■■□□□ 1.46
PGBD3Q8N328 UNC93B8-201ENST00000511903 705 ntBASIC24.16■■□□□ 1.46
PGBD3Q8N328 AC120024.1-201ENST00000562672 995 ntBASIC24.16■■□□□ 1.46
PGBD3Q8N328 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.16■■□□□ 1.46
PGBD3Q8N328 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PGBD3Q8N328 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.15■■□□□ 1.46
PGBD3Q8N328 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.15■■□□□ 1.46
PGBD3Q8N328 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
PGBD3Q8N328 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PGBD3Q8N328 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PGBD3Q8N328 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.15■■□□□ 1.46
PGBD3Q8N328 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.15■■□□□ 1.46
PGBD3Q8N328 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.15■■□□□ 1.46
PGBD3Q8N328 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PGBD3Q8N328 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms