Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 SUDS3P1-201ENST00000505831 966 ntBASIC31.16■■■□□ 2.58
PROM2Q8N271 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
PROM2Q8N271 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PROM2Q8N271 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PROM2Q8N271 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PROM2Q8N271 AC142381.2-201ENST00000566120 298 ntBASIC31.15■■■□□ 2.58
PROM2Q8N271 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC31.14■■■□□ 2.58
PROM2Q8N271 MIR5787-201ENST00000611784 55 ntBASIC31.14■■■□□ 2.58
PROM2Q8N271 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC31.14■■■□□ 2.58
PROM2Q8N271 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PROM2Q8N271 MTDHP2-201ENST00000601468 714 ntBASIC31.13■■■□□ 2.57
PROM2Q8N271 EXOG-217ENST00000630638 197 ntTSL 5 BASIC31.13■■■□□ 2.57
PROM2Q8N271 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
PROM2Q8N271 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
PROM2Q8N271 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.11■■■□□ 2.57
PROM2Q8N271 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
PROM2Q8N271 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
PROM2Q8N271 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
PROM2Q8N271 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
PROM2Q8N271 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
PROM2Q8N271 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PROM2Q8N271 TK2-202ENST00000417693 1046 ntTSL 2 BASIC31.1■■■□□ 2.57
PROM2Q8N271 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
PROM2Q8N271 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC31.09■■■□□ 2.57
PROM2Q8N271 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
PROM2Q8N271 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.09■■■□□ 2.57
PROM2Q8N271 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
PROM2Q8N271 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PROM2Q8N271 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC31.08■■■□□ 2.57
PROM2Q8N271 LGR4-203ENST00000480977 492 ntTSL 2 BASIC31.08■■■□□ 2.57
PROM2Q8N271 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC31.08■■■□□ 2.57
PROM2Q8N271 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
PROM2Q8N271 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC31.08■■■□□ 2.57
PROM2Q8N271 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC31.07■■■□□ 2.57
PROM2Q8N271 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
PROM2Q8N271 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC31.07■■■□□ 2.56
PROM2Q8N271 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
PROM2Q8N271 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PROM2Q8N271 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.07■■■□□ 2.56
PROM2Q8N271 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
PROM2Q8N271 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
PROM2Q8N271 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
PROM2Q8N271 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
PROM2Q8N271 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PROM2Q8N271 AK3-203ENST00000447596 705 ntTSL 2 BASIC31.05■■■□□ 2.56
PROM2Q8N271 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC31.04■■■□□ 2.56
PROM2Q8N271 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC31.04■■■□□ 2.56
PROM2Q8N271 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC31.04■■■□□ 2.56
PROM2Q8N271 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
PROM2Q8N271 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
PROM2Q8N271 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
PROM2Q8N271 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC31.03■■■□□ 2.56
PROM2Q8N271 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
PROM2Q8N271 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
PROM2Q8N271 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
PROM2Q8N271 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
PROM2Q8N271 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PROM2Q8N271 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC31.02■■■□□ 2.56
PROM2Q8N271 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC31.02■■■□□ 2.56
PROM2Q8N271 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
PROM2Q8N271 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PROM2Q8N271 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.01■■■□□ 2.55
PROM2Q8N271 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PROM2Q8N271 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.01■■■□□ 2.55
PROM2Q8N271 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PROM2Q8N271 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.01■■■□□ 2.55
PROM2Q8N271 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
PROM2Q8N271 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC31■■■□□ 2.55
PROM2Q8N271 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PROM2Q8N271 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PROM2Q8N271 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
PROM2Q8N271 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
PROM2Q8N271 UNC93B3-201ENST00000308076 687 ntBASIC30.99■■■□□ 2.55
PROM2Q8N271 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC30.99■■■□□ 2.55
PROM2Q8N271 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
PROM2Q8N271 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
PROM2Q8N271 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30.98■■■□□ 2.55
PROM2Q8N271 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
PROM2Q8N271 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
PROM2Q8N271 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
PROM2Q8N271 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
PROM2Q8N271 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PROM2Q8N271 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.96■■■□□ 2.55
PROM2Q8N271 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.96■■■□□ 2.55
PROM2Q8N271 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC30.96■■■□□ 2.55
PROM2Q8N271 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
PROM2Q8N271 HYI-206ENST00000372434 1025 ntTSL 5 BASIC30.95■■■□□ 2.55
PROM2Q8N271 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC30.95■■■□□ 2.55
PROM2Q8N271 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC30.95■■■□□ 2.55
PROM2Q8N271 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
PROM2Q8N271 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
PROM2Q8N271 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.94■■■□□ 2.54
PROM2Q8N271 ANKRD20A6P-201ENST00000618763 204 ntBASIC30.94■■■□□ 2.54
PROM2Q8N271 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.94■■■□□ 2.54
PROM2Q8N271 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
PROM2Q8N271 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC30.93■■■□□ 2.54
PROM2Q8N271 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
PROM2Q8N271 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC30.93■■■□□ 2.54
PROM2Q8N271 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.93■■■□□ 2.54
PROM2Q8N271 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms