Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.66■■□□□ 1.06
NIPAL3Q6P499 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NIPAL3Q6P499 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NIPAL3Q6P499 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NIPAL3Q6P499 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.65■■□□□ 1.06
NIPAL3Q6P499 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.65■■□□□ 1.06
NIPAL3Q6P499 MIR3960-201ENST00000583311 91 ntBASIC21.65■■□□□ 1.06
NIPAL3Q6P499 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NIPAL3Q6P499 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NIPAL3Q6P499 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.65■■□□□ 1.06
NIPAL3Q6P499 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NIPAL3Q6P499 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.65■■□□□ 1.06
NIPAL3Q6P499 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.64■■□□□ 1.06
NIPAL3Q6P499 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
NIPAL3Q6P499 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
NIPAL3Q6P499 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.64■■□□□ 1.06
NIPAL3Q6P499 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NIPAL3Q6P499 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NIPAL3Q6P499 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NIPAL3Q6P499 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.64■■□□□ 1.05
NIPAL3Q6P499 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.64■■□□□ 1.05
NIPAL3Q6P499 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.64■■□□□ 1.05
NIPAL3Q6P499 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.64■■□□□ 1.05
NIPAL3Q6P499 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NIPAL3Q6P499 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.63■■□□□ 1.05
NIPAL3Q6P499 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NIPAL3Q6P499 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
NIPAL3Q6P499 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.63■■□□□ 1.05
NIPAL3Q6P499 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NIPAL3Q6P499 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
NIPAL3Q6P499 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NIPAL3Q6P499 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NIPAL3Q6P499 AL139125.2-201ENST00000623134 1869 ntBASIC21.62■■□□□ 1.05
NIPAL3Q6P499 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NIPAL3Q6P499 RARRES2P2-201ENST00000394842 485 ntBASIC21.62■■□□□ 1.05
NIPAL3Q6P499 AC007029.1-201ENST00000604183 313 ntBASIC21.62■■□□□ 1.05
NIPAL3Q6P499 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.62■■□□□ 1.05
NIPAL3Q6P499 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.62■■□□□ 1.05
NIPAL3Q6P499 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NIPAL3Q6P499 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NIPAL3Q6P499 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.61■■□□□ 1.05
NIPAL3Q6P499 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NIPAL3Q6P499 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NIPAL3Q6P499 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NIPAL3Q6P499 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NIPAL3Q6P499 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.6■■□□□ 1.05
NIPAL3Q6P499 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.6■■□□□ 1.05
NIPAL3Q6P499 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
NIPAL3Q6P499 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.59■■□□□ 1.05
NIPAL3Q6P499 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NIPAL3Q6P499 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.59■■□□□ 1.05
NIPAL3Q6P499 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NIPAL3Q6P499 RP9P-202ENST00000450133 1212 ntBASIC21.59■■□□□ 1.05
NIPAL3Q6P499 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NIPAL3Q6P499 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NIPAL3Q6P499 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NIPAL3Q6P499 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NIPAL3Q6P499 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.59■■□□□ 1.05
NIPAL3Q6P499 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NIPAL3Q6P499 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NIPAL3Q6P499 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NIPAL3Q6P499 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.57■■□□□ 1.04
NIPAL3Q6P499 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NIPAL3Q6P499 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.57■■□□□ 1.04
NIPAL3Q6P499 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NIPAL3Q6P499 AC093536.1-201ENST00000569153 554 ntBASIC21.57■■□□□ 1.04
NIPAL3Q6P499 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NIPAL3Q6P499 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.57■■□□□ 1.04
NIPAL3Q6P499 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NIPAL3Q6P499 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NIPAL3Q6P499 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NIPAL3Q6P499 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NIPAL3Q6P499 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NIPAL3Q6P499 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NIPAL3Q6P499 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NIPAL3Q6P499 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NIPAL3Q6P499 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NIPAL3Q6P499 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NIPAL3Q6P499 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NIPAL3Q6P499 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NIPAL3Q6P499 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NIPAL3Q6P499 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NIPAL3Q6P499 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NIPAL3Q6P499 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NIPAL3Q6P499 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.55■■□□□ 1.04
NIPAL3Q6P499 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NIPAL3Q6P499 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NIPAL3Q6P499 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
NIPAL3Q6P499 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NIPAL3Q6P499 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NIPAL3Q6P499 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NIPAL3Q6P499 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NIPAL3Q6P499 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NIPAL3Q6P499 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NIPAL3Q6P499 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NIPAL3Q6P499 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.53■■□□□ 1.04
NIPAL3Q6P499 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NIPAL3Q6P499 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NIPAL3Q6P499 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.53■■□□□ 1.04
NIPAL3Q6P499 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms