Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.87■■□□□ 1.25
NIPAL1Q6NVV3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
NIPAL1Q6NVV3 AC012354.3-201ENST00000623734 483 ntBASIC22.87■■□□□ 1.25
NIPAL1Q6NVV3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NIPAL1Q6NVV3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NIPAL1Q6NVV3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NIPAL1Q6NVV3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NIPAL1Q6NVV3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NIPAL1Q6NVV3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NIPAL1Q6NVV3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
NIPAL1Q6NVV3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
NIPAL1Q6NVV3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NIPAL1Q6NVV3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
NIPAL1Q6NVV3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NIPAL1Q6NVV3 AC020928.2-201ENST00000588717 2197 ntBASIC22.85■■□□□ 1.25
NIPAL1Q6NVV3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
NIPAL1Q6NVV3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
NIPAL1Q6NVV3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
NIPAL1Q6NVV3 AC129492.7-201ENST00000622992 756 ntBASIC22.85■■□□□ 1.25
NIPAL1Q6NVV3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
NIPAL1Q6NVV3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NIPAL1Q6NVV3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
NIPAL1Q6NVV3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
NIPAL1Q6NVV3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
NIPAL1Q6NVV3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
NIPAL1Q6NVV3 MIR6765-201ENST00000614092 87 ntBASIC22.84■■□□□ 1.25
NIPAL1Q6NVV3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
NIPAL1Q6NVV3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
NIPAL1Q6NVV3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.83■■□□□ 1.25
NIPAL1Q6NVV3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.83■■□□□ 1.25
NIPAL1Q6NVV3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
NIPAL1Q6NVV3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
NIPAL1Q6NVV3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.83■■□□□ 1.25
NIPAL1Q6NVV3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
NIPAL1Q6NVV3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
NIPAL1Q6NVV3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
NIPAL1Q6NVV3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.82■■□□□ 1.24
NIPAL1Q6NVV3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NIPAL1Q6NVV3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
NIPAL1Q6NVV3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
NIPAL1Q6NVV3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
NIPAL1Q6NVV3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NIPAL1Q6NVV3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NIPAL1Q6NVV3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NIPAL1Q6NVV3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
NIPAL1Q6NVV3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
NIPAL1Q6NVV3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
NIPAL1Q6NVV3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
NIPAL1Q6NVV3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.81■■□□□ 1.24
NIPAL1Q6NVV3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.81■■□□□ 1.24
NIPAL1Q6NVV3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.81■■□□□ 1.24
NIPAL1Q6NVV3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
NIPAL1Q6NVV3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
NIPAL1Q6NVV3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
NIPAL1Q6NVV3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NIPAL1Q6NVV3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.8■■□□□ 1.24
NIPAL1Q6NVV3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
NIPAL1Q6NVV3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.8■■□□□ 1.24
NIPAL1Q6NVV3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NIPAL1Q6NVV3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
NIPAL1Q6NVV3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NIPAL1Q6NVV3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
NIPAL1Q6NVV3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NIPAL1Q6NVV3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NIPAL1Q6NVV3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.79■■□□□ 1.24
NIPAL1Q6NVV3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.79■■□□□ 1.24
NIPAL1Q6NVV3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
NIPAL1Q6NVV3 DUX4L9-201ENST00000449051 1259 ntBASIC22.79■■□□□ 1.24
NIPAL1Q6NVV3 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.79■■□□□ 1.24
NIPAL1Q6NVV3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NIPAL1Q6NVV3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
NIPAL1Q6NVV3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NIPAL1Q6NVV3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NIPAL1Q6NVV3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NIPAL1Q6NVV3 TSPY13P-201ENST00000338964 914 ntBASIC22.78■■□□□ 1.24
NIPAL1Q6NVV3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
NIPAL1Q6NVV3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
NIPAL1Q6NVV3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.78■■□□□ 1.24
NIPAL1Q6NVV3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.78■■□□□ 1.24
NIPAL1Q6NVV3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
NIPAL1Q6NVV3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NIPAL1Q6NVV3 AC092803.2-201ENST00000564287 1899 ntBASIC22.77■■□□□ 1.24
NIPAL1Q6NVV3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
NIPAL1Q6NVV3 ATP5G2P3-201ENST00000429083 425 ntBASIC22.77■■□□□ 1.24
NIPAL1Q6NVV3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.77■■□□□ 1.24
NIPAL1Q6NVV3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.77■■□□□ 1.24
NIPAL1Q6NVV3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.77■■□□□ 1.23
NIPAL1Q6NVV3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NIPAL1Q6NVV3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
NIPAL1Q6NVV3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NIPAL1Q6NVV3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
NIPAL1Q6NVV3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.76■■□□□ 1.23
NIPAL1Q6NVV3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.76■■□□□ 1.23
NIPAL1Q6NVV3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NIPAL1Q6NVV3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
NIPAL1Q6NVV3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NIPAL1Q6NVV3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
NIPAL1Q6NVV3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.75■■□□□ 1.23
NIPAL1Q6NVV3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.75■■□□□ 1.23
NIPAL1Q6NVV3 AC004987.1-201ENST00000428627 508 ntBASIC22.75■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms