Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST2H2BCQ6DN03 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.96■□□□□ 0.95
HIST2H2BCQ6DN03 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST2H2BCQ6DN03 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HIST2H2BCQ6DN03 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.95■□□□□ 0.94
HIST2H2BCQ6DN03 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
HIST2H2BCQ6DN03 AC024257.2-201ENST00000549699 147 ntBASIC20.95■□□□□ 0.94
HIST2H2BCQ6DN03 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.95■□□□□ 0.94
HIST2H2BCQ6DN03 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.94■□□□□ 0.94
HIST2H2BCQ6DN03 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.94■□□□□ 0.94
HIST2H2BCQ6DN03 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIST2H2BCQ6DN03 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
HIST2H2BCQ6DN03 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.94■□□□□ 0.94
HIST2H2BCQ6DN03 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIST2H2BCQ6DN03 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HIST2H2BCQ6DN03 IKBKGP1-201ENST00000612193 1073 ntBASIC20.94■□□□□ 0.94
HIST2H2BCQ6DN03 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIST2H2BCQ6DN03 AP004833.2-201ENST00000532228 1454 ntBASIC20.94■□□□□ 0.94
HIST2H2BCQ6DN03 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.93■□□□□ 0.94
HIST2H2BCQ6DN03 AL355001.2-201ENST00000620617 1191 ntBASIC20.93■□□□□ 0.94
HIST2H2BCQ6DN03 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HIST2H2BCQ6DN03 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.93■□□□□ 0.94
HIST2H2BCQ6DN03 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIST2H2BCQ6DN03 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIST2H2BCQ6DN03 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIST2H2BCQ6DN03 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.92■□□□□ 0.94
HIST2H2BCQ6DN03 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.92■□□□□ 0.94
HIST2H2BCQ6DN03 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.92■□□□□ 0.94
HIST2H2BCQ6DN03 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIST2H2BCQ6DN03 AF213884.3-201ENST00000563833 479 ntBASIC20.92■□□□□ 0.94
HIST2H2BCQ6DN03 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HIST2H2BCQ6DN03 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
HIST2H2BCQ6DN03 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
HIST2H2BCQ6DN03 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.91■□□□□ 0.94
HIST2H2BCQ6DN03 AL136967.2-201ENST00000623968 743 ntBASIC20.91■□□□□ 0.94
HIST2H2BCQ6DN03 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST2H2BCQ6DN03 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.9■□□□□ 0.94
HIST2H2BCQ6DN03 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST2H2BCQ6DN03 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST2H2BCQ6DN03 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST2H2BCQ6DN03 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.9■□□□□ 0.94
HIST2H2BCQ6DN03 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HIST2H2BCQ6DN03 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.9■□□□□ 0.94
HIST2H2BCQ6DN03 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.9■□□□□ 0.94
HIST2H2BCQ6DN03 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
HIST2H2BCQ6DN03 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST2H2BCQ6DN03 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HIST2H2BCQ6DN03 EDA-201ENST00000338901 1233 ntBASIC20.89■□□□□ 0.93
HIST2H2BCQ6DN03 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIST2H2BCQ6DN03 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.89■□□□□ 0.93
HIST2H2BCQ6DN03 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.89■□□□□ 0.93
HIST2H2BCQ6DN03 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.89■□□□□ 0.93
HIST2H2BCQ6DN03 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST2H2BCQ6DN03 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST2H2BCQ6DN03 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST2H2BCQ6DN03 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.88■□□□□ 0.93
HIST2H2BCQ6DN03 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HIST2H2BCQ6DN03 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
HIST2H2BCQ6DN03 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.88■□□□□ 0.93
HIST2H2BCQ6DN03 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST2H2BCQ6DN03 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
HIST2H2BCQ6DN03 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIST2H2BCQ6DN03 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIST2H2BCQ6DN03 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.87■□□□□ 0.93
HIST2H2BCQ6DN03 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIST2H2BCQ6DN03 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIST2H2BCQ6DN03 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
HIST2H2BCQ6DN03 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIST2H2BCQ6DN03 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
HIST2H2BCQ6DN03 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.86■□□□□ 0.93
HIST2H2BCQ6DN03 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIST2H2BCQ6DN03 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.86■□□□□ 0.93
HIST2H2BCQ6DN03 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.86■□□□□ 0.93
HIST2H2BCQ6DN03 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.86■□□□□ 0.93
HIST2H2BCQ6DN03 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIST2H2BCQ6DN03 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HIST2H2BCQ6DN03 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIST2H2BCQ6DN03 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIST2H2BCQ6DN03 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.84■□□□□ 0.93
HIST2H2BCQ6DN03 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HIST2H2BCQ6DN03 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HIST2H2BCQ6DN03 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.83■□□□□ 0.93
HIST2H2BCQ6DN03 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HIST2H2BCQ6DN03 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HIST2H2BCQ6DN03 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HIST2H2BCQ6DN03 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.83■□□□□ 0.93
HIST2H2BCQ6DN03 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HIST2H2BCQ6DN03 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HIST2H2BCQ6DN03 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.83■□□□□ 0.92
HIST2H2BCQ6DN03 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST2H2BCQ6DN03 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HIST2H2BCQ6DN03 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST2H2BCQ6DN03 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
HIST2H2BCQ6DN03 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HIST2H2BCQ6DN03 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
HIST2H2BCQ6DN03 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HIST2H2BCQ6DN03 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HIST2H2BCQ6DN03 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.81■□□□□ 0.92
HIST2H2BCQ6DN03 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.81■□□□□ 0.92
HIST2H2BCQ6DN03 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms