Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 MTDHP2-201ENST00000601468 714 ntBASIC26.63■■□□□ 1.85
TRIM60Q495X7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM60Q495X7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM60Q495X7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM60Q495X7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM60Q495X7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.62■■□□□ 1.85
TRIM60Q495X7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TRIM60Q495X7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
TRIM60Q495X7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.62■■□□□ 1.85
TRIM60Q495X7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.62■■□□□ 1.85
TRIM60Q495X7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
TRIM60Q495X7 AL356740.2-201ENST00000601559 647 ntBASIC26.62■■□□□ 1.85
TRIM60Q495X7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
TRIM60Q495X7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TRIM60Q495X7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TRIM60Q495X7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TRIM60Q495X7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.6■■□□□ 1.85
TRIM60Q495X7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.6■■□□□ 1.85
TRIM60Q495X7 AL449106.1-201ENST00000608517 1980 ntBASIC26.6■■□□□ 1.85
TRIM60Q495X7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TRIM60Q495X7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.6■■□□□ 1.85
TRIM60Q495X7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.59■■□□□ 1.85
TRIM60Q495X7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
TRIM60Q495X7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
TRIM60Q495X7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
TRIM60Q495X7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TRIM60Q495X7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.58■■□□□ 1.85
TRIM60Q495X7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.58■■□□□ 1.85
TRIM60Q495X7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.58■■□□□ 1.85
TRIM60Q495X7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.58■■□□□ 1.85
TRIM60Q495X7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.57■■□□□ 1.84
TRIM60Q495X7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TRIM60Q495X7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.57■■□□□ 1.84
TRIM60Q495X7 AC133561.4-201ENST00000566112 224 ntBASIC26.57■■□□□ 1.84
TRIM60Q495X7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
TRIM60Q495X7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
TRIM60Q495X7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
TRIM60Q495X7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM60Q495X7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM60Q495X7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.56■■□□□ 1.84
TRIM60Q495X7 AC092666.2-201ENST00000613287 246 ntBASIC26.56■■□□□ 1.84
TRIM60Q495X7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM60Q495X7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM60Q495X7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.55■■□□□ 1.84
TRIM60Q495X7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.55■■□□□ 1.84
TRIM60Q495X7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM60Q495X7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.54■■□□□ 1.84
TRIM60Q495X7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.54■■□□□ 1.84
TRIM60Q495X7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.54■■□□□ 1.84
TRIM60Q495X7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM60Q495X7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.53■■□□□ 1.84
TRIM60Q495X7 ZNRF2P3-201ENST00000424200 374 ntBASIC26.53■■□□□ 1.84
TRIM60Q495X7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.53■■□□□ 1.84
TRIM60Q495X7 AL512631.2-201ENST00000604634 923 ntBASIC26.53■■□□□ 1.84
TRIM60Q495X7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM60Q495X7 RARRES2P6-201ENST00000567333 442 ntBASIC26.52■■□□□ 1.84
TRIM60Q495X7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.52■■□□□ 1.84
TRIM60Q495X7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM60Q495X7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.51■■□□□ 1.83
TRIM60Q495X7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM60Q495X7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.51■■□□□ 1.83
TRIM60Q495X7 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.51■■□□□ 1.83
TRIM60Q495X7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.51■■□□□ 1.83
TRIM60Q495X7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM60Q495X7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.5■■□□□ 1.83
TRIM60Q495X7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.5■■□□□ 1.83
TRIM60Q495X7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
TRIM60Q495X7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM60Q495X7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.49■■□□□ 1.83
TRIM60Q495X7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
TRIM60Q495X7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM60Q495X7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM60Q495X7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.49■■□□□ 1.83
TRIM60Q495X7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
TRIM60Q495X7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM60Q495X7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM60Q495X7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM60Q495X7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.48■■□□□ 1.83
TRIM60Q495X7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM60Q495X7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM60Q495X7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.48■■□□□ 1.83
TRIM60Q495X7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM60Q495X7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.47■■□□□ 1.83
TRIM60Q495X7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.47■■□□□ 1.83
TRIM60Q495X7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.47■■□□□ 1.83
TRIM60Q495X7 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.47■■□□□ 1.83
TRIM60Q495X7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM60Q495X7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.46■■□□□ 1.83
TRIM60Q495X7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM60Q495X7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.46■■□□□ 1.83
TRIM60Q495X7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM60Q495X7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
TRIM60Q495X7 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.46■■□□□ 1.83
TRIM60Q495X7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM60Q495X7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TRIM60Q495X7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.45■■□□□ 1.82
TRIM60Q495X7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.45■■□□□ 1.82
TRIM60Q495X7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.45■■□□□ 1.82
TRIM60Q495X7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TRIM60Q495X7 BX255925.1-201ENST00000566954 1854 ntBASIC26.45■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms