Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNAI3Q3KNW1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNAI3Q3KNW1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNAI3Q3KNW1 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.73■□□□□ 0.91
SNAI3Q3KNW1 RAP2CP1-202ENST00000605179 643 ntBASIC20.73■□□□□ 0.91
SNAI3Q3KNW1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNAI3Q3KNW1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNAI3Q3KNW1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNAI3Q3KNW1 AC026202.3-201ENST00000600805 1127 ntBASIC20.72■□□□□ 0.91
SNAI3Q3KNW1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNAI3Q3KNW1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNAI3Q3KNW1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.72■□□□□ 0.91
SNAI3Q3KNW1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNAI3Q3KNW1 AC022211.4-201ENST00000625094 2161 ntBASIC20.72■□□□□ 0.91
SNAI3Q3KNW1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNAI3Q3KNW1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNAI3Q3KNW1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNAI3Q3KNW1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.71■□□□□ 0.91
SNAI3Q3KNW1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNAI3Q3KNW1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.71■□□□□ 0.91
SNAI3Q3KNW1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNAI3Q3KNW1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNAI3Q3KNW1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNAI3Q3KNW1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNAI3Q3KNW1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.7■□□□□ 0.9
SNAI3Q3KNW1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNAI3Q3KNW1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNAI3Q3KNW1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNAI3Q3KNW1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
SNAI3Q3KNW1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.69■□□□□ 0.9
SNAI3Q3KNW1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNAI3Q3KNW1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SNAI3Q3KNW1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNAI3Q3KNW1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNAI3Q3KNW1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNAI3Q3KNW1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNAI3Q3KNW1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNAI3Q3KNW1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.68■□□□□ 0.9
SNAI3Q3KNW1 AC009831.1-201ENST00000580420 1582 ntBASIC20.68■□□□□ 0.9
SNAI3Q3KNW1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNAI3Q3KNW1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.67■□□□□ 0.9
SNAI3Q3KNW1 AC142381.3-201ENST00000568208 1670 ntBASIC20.67■□□□□ 0.9
SNAI3Q3KNW1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNAI3Q3KNW1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNAI3Q3KNW1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNAI3Q3KNW1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SNAI3Q3KNW1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNAI3Q3KNW1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNAI3Q3KNW1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SNAI3Q3KNW1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNAI3Q3KNW1 HSD17B1P1-201ENST00000590052 955 ntBASIC20.66■□□□□ 0.9
SNAI3Q3KNW1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNAI3Q3KNW1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SNAI3Q3KNW1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNAI3Q3KNW1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNAI3Q3KNW1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.66■□□□□ 0.9
SNAI3Q3KNW1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNAI3Q3KNW1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.66■□□□□ 0.9
SNAI3Q3KNW1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNAI3Q3KNW1 AC138932.3-201ENST00000567634 1902 ntBASIC20.65■□□□□ 0.9
SNAI3Q3KNW1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
SNAI3Q3KNW1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.65■□□□□ 0.9
SNAI3Q3KNW1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNAI3Q3KNW1 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.65■□□□□ 0.9
SNAI3Q3KNW1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.65■□□□□ 0.9
SNAI3Q3KNW1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
SNAI3Q3KNW1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNAI3Q3KNW1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SNAI3Q3KNW1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNAI3Q3KNW1 AC133552.2-201ENST00000619106 1032 ntBASIC20.64■□□□□ 0.89
SNAI3Q3KNW1 SLC6A10P-202ENST00000431994 2058 ntBASIC20.64■□□□□ 0.89
SNAI3Q3KNW1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNAI3Q3KNW1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNAI3Q3KNW1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNAI3Q3KNW1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SNAI3Q3KNW1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.64■□□□□ 0.89
SNAI3Q3KNW1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
SNAI3Q3KNW1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNAI3Q3KNW1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNAI3Q3KNW1 RARRES2P2-201ENST00000394842 485 ntBASIC20.63■□□□□ 0.89
SNAI3Q3KNW1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.63■□□□□ 0.89
SNAI3Q3KNW1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNAI3Q3KNW1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNAI3Q3KNW1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNAI3Q3KNW1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SNAI3Q3KNW1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNAI3Q3KNW1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNAI3Q3KNW1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNAI3Q3KNW1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNAI3Q3KNW1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNAI3Q3KNW1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNAI3Q3KNW1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNAI3Q3KNW1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNAI3Q3KNW1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNAI3Q3KNW1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNAI3Q3KNW1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNAI3Q3KNW1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNAI3Q3KNW1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SNAI3Q3KNW1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SNAI3Q3KNW1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms