Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLRN1P58418 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CLRN1P58418 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.27■■□□□ 1
CLRN1P58418 HSD17B1P1-201ENST00000590052 955 ntBASIC21.27■■□□□ 1
CLRN1P58418 AC026202.3-201ENST00000600805 1127 ntBASIC21.27■■□□□ 1
CLRN1P58418 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLRN1P58418 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLRN1P58418 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.26■□□□□ 0.99
CLRN1P58418 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLRN1P58418 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.26■□□□□ 0.99
CLRN1P58418 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.26■□□□□ 0.99
CLRN1P58418 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLRN1P58418 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLRN1P58418 RAP2CP1-202ENST00000605179 643 ntBASIC21.26■□□□□ 0.99
CLRN1P58418 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLRN1P58418 AC097639.1-201ENST00000565519 1891 ntBASIC21.26■□□□□ 0.99
CLRN1P58418 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.25■□□□□ 0.99
CLRN1P58418 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.25■□□□□ 0.99
CLRN1P58418 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CLRN1P58418 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLRN1P58418 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CLRN1P58418 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLRN1P58418 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLRN1P58418 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLRN1P58418 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CLRN1P58418 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.24■□□□□ 0.99
CLRN1P58418 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLRN1P58418 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.24■□□□□ 0.99
CLRN1P58418 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLRN1P58418 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLRN1P58418 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLRN1P58418 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLRN1P58418 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLRN1P58418 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
CLRN1P58418 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLRN1P58418 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLRN1P58418 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CLRN1P58418 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLRN1P58418 RARRES2P2-201ENST00000394842 485 ntBASIC21.23■□□□□ 0.99
CLRN1P58418 AC133552.2-201ENST00000619106 1032 ntBASIC21.23■□□□□ 0.99
CLRN1P58418 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.23■□□□□ 0.99
CLRN1P58418 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.23■□□□□ 0.99
CLRN1P58418 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLRN1P58418 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLRN1P58418 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.22■□□□□ 0.99
CLRN1P58418 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLRN1P58418 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLRN1P58418 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLRN1P58418 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLRN1P58418 AC009831.1-201ENST00000580420 1582 ntBASIC21.22■□□□□ 0.99
CLRN1P58418 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.22■□□□□ 0.99
CLRN1P58418 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLRN1P58418 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLRN1P58418 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.21■□□□□ 0.99
CLRN1P58418 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CLRN1P58418 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLRN1P58418 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLRN1P58418 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLRN1P58418 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CLRN1P58418 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.19■□□□□ 0.98
CLRN1P58418 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLRN1P58418 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CLRN1P58418 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
CLRN1P58418 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.19■□□□□ 0.98
CLRN1P58418 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLRN1P58418 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLRN1P58418 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLRN1P58418 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLRN1P58418 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLRN1P58418 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.18■□□□□ 0.98
CLRN1P58418 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLRN1P58418 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLRN1P58418 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CLRN1P58418 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CLRN1P58418 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLRN1P58418 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLRN1P58418 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CLRN1P58418 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLRN1P58418 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLRN1P58418 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLRN1P58418 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.17■□□□□ 0.98
CLRN1P58418 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLRN1P58418 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLRN1P58418 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLRN1P58418 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
CLRN1P58418 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLRN1P58418 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLRN1P58418 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLRN1P58418 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.15■□□□□ 0.98
CLRN1P58418 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLRN1P58418 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLRN1P58418 KRT18P10-201ENST00000388836 1287 ntBASIC21.15■□□□□ 0.98
CLRN1P58418 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.15■□□□□ 0.98
CLRN1P58418 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.15■□□□□ 0.98
CLRN1P58418 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.15■□□□□ 0.98
CLRN1P58418 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CLRN1P58418 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLRN1P58418 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CLRN1P58418 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLRN1P58418 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms