Protein–RNA interactions for Protein: P55774

CCL18, C-C motif chemokine 18, humanhuman

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL18P55774 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.72■□□□□ 0.27
CCL18P55774 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCL18P55774 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.71■□□□□ 0.27
CCL18P55774 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.71■□□□□ 0.27
CCL18P55774 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL18P55774 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL18P55774 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL18P55774 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL18P55774 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.71■□□□□ 0.27
CCL18P55774 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL18P55774 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.71■□□□□ 0.27
CCL18P55774 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL18P55774 AC091060.1-201ENST00000623524 1766 ntBASIC16.71■□□□□ 0.27
CCL18P55774 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCL18P55774 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC16.71■□□□□ 0.27
CCL18P55774 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCL18P55774 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL18P55774 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL18P55774 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL18P55774 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL18P55774 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL18P55774 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL18P55774 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL18P55774 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.7■□□□□ 0.26
CCL18P55774 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL18P55774 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL18P55774 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL18P55774 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL18P55774 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL18P55774 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.69■□□□□ 0.26
CCL18P55774 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL18P55774 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CCL18P55774 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL18P55774 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL18P55774 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL18P55774 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
CCL18P55774 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL18P55774 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL18P55774 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL18P55774 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL18P55774 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.68■□□□□ 0.26
CCL18P55774 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL18P55774 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CCL18P55774 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL18P55774 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
CCL18P55774 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL18P55774 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL18P55774 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.67■□□□□ 0.26
CCL18P55774 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
CCL18P55774 YBX1P4-201ENST00000392794 808 ntBASIC16.67■□□□□ 0.26
CCL18P55774 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCL18P55774 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CCL18P55774 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL18P55774 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL18P55774 AC010980.1-201ENST00000587192 1142 ntBASIC16.67■□□□□ 0.26
CCL18P55774 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL18P55774 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL18P55774 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL18P55774 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL18P55774 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL18P55774 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCL18P55774 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL18P55774 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL18P55774 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.66■□□□□ 0.26
CCL18P55774 RARRES2P1-201ENST00000474487 481 ntBASIC16.66■□□□□ 0.26
CCL18P55774 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL18P55774 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL18P55774 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CCL18P55774 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
CCL18P55774 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL18P55774 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL18P55774 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL18P55774 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL18P55774 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL18P55774 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL18P55774 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC16.65■□□□□ 0.26
CCL18P55774 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL18P55774 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.65■□□□□ 0.26
CCL18P55774 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL18P55774 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.65■□□□□ 0.26
CCL18P55774 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL18P55774 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
CCL18P55774 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL18P55774 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CCL18P55774 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL18P55774 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL18P55774 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL18P55774 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL18P55774 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL18P55774 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL18P55774 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CCL18P55774 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL18P55774 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL18P55774 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL18P55774 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.63■□□□□ 0.25
CCL18P55774 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL18P55774 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC16.63■□□□□ 0.25
CCL18P55774 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL18P55774 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL18P55774 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms