Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ERN1-208ENST00000606895 2068 ntBASIC23.47■■□□□ 1.35
CLCNKAP51800 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.47■■□□□ 1.35
CLCNKAP51800 MIR4508-201ENST00000584178 70 ntBASIC23.47■■□□□ 1.35
CLCNKAP51800 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CLCNKAP51800 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.47■■□□□ 1.35
CLCNKAP51800 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CLCNKAP51800 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CLCNKAP51800 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CLCNKAP51800 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CLCNKAP51800 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.46■■□□□ 1.35
CLCNKAP51800 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.46■■□□□ 1.35
CLCNKAP51800 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.45■■□□□ 1.35
CLCNKAP51800 AC092803.2-201ENST00000564287 1899 ntBASIC23.45■■□□□ 1.35
CLCNKAP51800 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.45■■□□□ 1.34
CLCNKAP51800 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
CLCNKAP51800 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CLCNKAP51800 AC103834.1-201ENST00000520383 144 ntBASIC23.45■■□□□ 1.34
CLCNKAP51800 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.45■■□□□ 1.34
CLCNKAP51800 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.45■■□□□ 1.34
CLCNKAP51800 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CLCNKAP51800 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
CLCNKAP51800 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CLCNKAP51800 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.44■■□□□ 1.34
CLCNKAP51800 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CLCNKAP51800 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
CLCNKAP51800 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.44■■□□□ 1.34
CLCNKAP51800 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.44■■□□□ 1.34
CLCNKAP51800 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.44■■□□□ 1.34
CLCNKAP51800 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CLCNKAP51800 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CLCNKAP51800 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
CLCNKAP51800 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.43■■□□□ 1.34
CLCNKAP51800 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CLCNKAP51800 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CLCNKAP51800 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CLCNKAP51800 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CLCNKAP51800 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.43■■□□□ 1.34
CLCNKAP51800 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CLCNKAP51800 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.42■■□□□ 1.34
CLCNKAP51800 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
CLCNKAP51800 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.42■■□□□ 1.34
CLCNKAP51800 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
CLCNKAP51800 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CLCNKAP51800 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.41■■□□□ 1.34
CLCNKAP51800 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CLCNKAP51800 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CLCNKAP51800 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.41■■□□□ 1.34
CLCNKAP51800 YBX1P4-201ENST00000392794 808 ntBASIC23.41■■□□□ 1.34
CLCNKAP51800 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CLCNKAP51800 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CLCNKAP51800 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.41■■□□□ 1.34
CLCNKAP51800 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CLCNKAP51800 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.4■■□□□ 1.34
CLCNKAP51800 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
CLCNKAP51800 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CLCNKAP51800 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CLCNKAP51800 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CLCNKAP51800 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CLCNKAP51800 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CLCNKAP51800 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CLCNKAP51800 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CLCNKAP51800 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
CLCNKAP51800 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
CLCNKAP51800 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.39■■□□□ 1.33
CLCNKAP51800 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
CLCNKAP51800 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CLCNKAP51800 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.33
CLCNKAP51800 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CLCNKAP51800 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.39■■□□□ 1.33
CLCNKAP51800 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CLCNKAP51800 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
CLCNKAP51800 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.38■■□□□ 1.33
CLCNKAP51800 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.38■■□□□ 1.33
CLCNKAP51800 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLCNKAP51800 AC022616.5-201ENST00000518796 181 ntBASIC23.38■■□□□ 1.33
CLCNKAP51800 AC010501.1-201ENST00000606270 1962 ntBASIC23.38■■□□□ 1.33
CLCNKAP51800 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.37■■□□□ 1.33
CLCNKAP51800 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CLCNKAP51800 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CLCNKAP51800 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLCNKAP51800 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLCNKAP51800 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLCNKAP51800 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.37■■□□□ 1.33
CLCNKAP51800 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLCNKAP51800 AC096887.2-201ENST00000623443 1957 ntBASIC23.36■■□□□ 1.33
CLCNKAP51800 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLCNKAP51800 KRT8P33-201ENST00000508125 1423 ntBASIC23.36■■□□□ 1.33
CLCNKAP51800 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CLCNKAP51800 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.36■■□□□ 1.33
CLCNKAP51800 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CLCNKAP51800 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLCNKAP51800 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.36■■□□□ 1.33
CLCNKAP51800 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLCNKAP51800 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.35■■□□□ 1.33
CLCNKAP51800 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
CLCNKAP51800 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.35■■□□□ 1.33
CLCNKAP51800 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CLCNKAP51800 AC091060.1-201ENST00000623524 1766 ntBASIC23.35■■□□□ 1.33
CLCNKAP51800 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CLCNKAP51800 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms