Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.68■■□□□ 1.86
CDK7P50613 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CDK7P50613 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.68■■□□□ 1.86
CDK7P50613 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDK7P50613 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDK7P50613 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CDK7P50613 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.67■■□□□ 1.86
CDK7P50613 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.67■■□□□ 1.86
CDK7P50613 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.67■■□□□ 1.86
CDK7P50613 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.67■■□□□ 1.86
CDK7P50613 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.67■■□□□ 1.86
CDK7P50613 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.67■■□□□ 1.86
CDK7P50613 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
CDK7P50613 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
CDK7P50613 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
CDK7P50613 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
CDK7P50613 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.65■■□□□ 1.86
CDK7P50613 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.65■■□□□ 1.86
CDK7P50613 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDK7P50613 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.65■■□□□ 1.86
CDK7P50613 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CDK7P50613 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CDK7P50613 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CDK7P50613 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
CDK7P50613 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDK7P50613 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.63■■□□□ 1.85
CDK7P50613 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.63■■□□□ 1.85
CDK7P50613 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CDK7P50613 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
CDK7P50613 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
CDK7P50613 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.62■■□□□ 1.85
CDK7P50613 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
CDK7P50613 AC139426.1-201ENST00000568218 2529 ntBASIC26.62■■□□□ 1.85
CDK7P50613 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
CDK7P50613 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CDK7P50613 MIR4281-201ENST00000580852 62 ntBASIC26.61■■□□□ 1.85
CDK7P50613 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.61■■□□□ 1.85
CDK7P50613 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CDK7P50613 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
CDK7P50613 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CDK7P50613 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CDK7P50613 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CDK7P50613 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.61■■□□□ 1.85
CDK7P50613 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.6■■□□□ 1.85
CDK7P50613 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
CDK7P50613 AL136116.3-201ENST00000402907 1138 ntBASIC26.6■■□□□ 1.85
CDK7P50613 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.6■■□□□ 1.85
CDK7P50613 AL117332.1-201ENST00000622628 974 ntBASIC26.6■■□□□ 1.85
CDK7P50613 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CDK7P50613 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDK7P50613 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.59■■□□□ 1.85
CDK7P50613 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.59■■□□□ 1.85
CDK7P50613 MIR3621-201ENST00000580529 85 ntBASIC26.59■■□□□ 1.85
CDK7P50613 BX255925.1-201ENST00000566954 1854 ntBASIC26.59■■□□□ 1.85
CDK7P50613 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.59■■□□□ 1.85
CDK7P50613 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDK7P50613 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDK7P50613 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.84
CDK7P50613 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDK7P50613 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
CDK7P50613 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDK7P50613 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CDK7P50613 AC110285.6-201ENST00000617652 491 ntBASIC26.57■■□□□ 1.84
CDK7P50613 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.57■■□□□ 1.84
CDK7P50613 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.57■■□□□ 1.84
CDK7P50613 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDK7P50613 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CDK7P50613 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CDK7P50613 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.56■■□□□ 1.84
CDK7P50613 AC010997.5-201ENST00000609182 354 ntBASIC26.56■■□□□ 1.84
CDK7P50613 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CDK7P50613 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDK7P50613 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDK7P50613 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
CDK7P50613 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
CDK7P50613 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CDK7P50613 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.55■■□□□ 1.84
CDK7P50613 MIR6724-1-201ENST00000616420 92 ntBASIC26.55■■□□□ 1.84
CDK7P50613 MIR6724-2-201ENST00000616483 92 ntBASIC26.55■■□□□ 1.84
CDK7P50613 MIR6724-4-201ENST00000617390 92 ntBASIC26.55■■□□□ 1.84
CDK7P50613 MIR6724-3-201ENST00000622482 92 ntBASIC26.55■■□□□ 1.84
CDK7P50613 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
CDK7P50613 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.55■■□□□ 1.84
CDK7P50613 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.55■■□□□ 1.84
CDK7P50613 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDK7P50613 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.54■■□□□ 1.84
CDK7P50613 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.54■■□□□ 1.84
CDK7P50613 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.54■■□□□ 1.84
CDK7P50613 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDK7P50613 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
CDK7P50613 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CDK7P50613 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.53■■□□□ 1.84
CDK7P50613 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDK7P50613 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
CDK7P50613 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.53■■□□□ 1.84
CDK7P50613 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CDK7P50613 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.52■■□□□ 1.84
CDK7P50613 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDK7P50613 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
CDK7P50613 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms