Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CPT1AP50416 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
CPT1AP50416 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.83■■□□□ 1.89
CPT1AP50416 KRT16P3-201ENST00000439127 1283 ntBASIC26.83■■□□□ 1.89
CPT1AP50416 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.83■■□□□ 1.89
CPT1AP50416 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CPT1AP50416 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CPT1AP50416 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
CPT1AP50416 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CPT1AP50416 AC021242.3-201ENST00000607598 1377 ntBASIC26.82■■□□□ 1.88
CPT1AP50416 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.82■■□□□ 1.88
CPT1AP50416 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CPT1AP50416 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
CPT1AP50416 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.81■■□□□ 1.88
CPT1AP50416 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CPT1AP50416 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.81■■□□□ 1.88
CPT1AP50416 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.81■■□□□ 1.88
CPT1AP50416 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
CPT1AP50416 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
CPT1AP50416 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CPT1AP50416 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CPT1AP50416 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
CPT1AP50416 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
CPT1AP50416 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CPT1AP50416 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CPT1AP50416 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.8■■□□□ 1.88
CPT1AP50416 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.8■■□□□ 1.88
CPT1AP50416 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CPT1AP50416 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CPT1AP50416 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CPT1AP50416 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.79■■□□□ 1.88
CPT1AP50416 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CPT1AP50416 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
CPT1AP50416 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
CPT1AP50416 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.79■■□□□ 1.88
CPT1AP50416 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CPT1AP50416 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.78■■□□□ 1.88
CPT1AP50416 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.78■■□□□ 1.88
CPT1AP50416 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.78■■□□□ 1.88
CPT1AP50416 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CPT1AP50416 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.77■■□□□ 1.88
CPT1AP50416 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.77■■□□□ 1.88
CPT1AP50416 TSPY9P-201ENST00000440215 945 ntBASIC26.77■■□□□ 1.88
CPT1AP50416 TSPY11P-201ENST00000442607 1045 ntBASIC26.77■■□□□ 1.88
CPT1AP50416 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CPT1AP50416 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
CPT1AP50416 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.76■■□□□ 1.87
CPT1AP50416 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.76■■□□□ 1.87
CPT1AP50416 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
CPT1AP50416 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
CPT1AP50416 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CPT1AP50416 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
CPT1AP50416 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.75■■□□□ 1.87
CPT1AP50416 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.75■■□□□ 1.87
CPT1AP50416 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.75■■□□□ 1.87
CPT1AP50416 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.75■■□□□ 1.87
CPT1AP50416 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
CPT1AP50416 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CPT1AP50416 MIR4281-201ENST00000580852 62 ntBASIC26.74■■□□□ 1.87
CPT1AP50416 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CPT1AP50416 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.73■■□□□ 1.87
CPT1AP50416 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
CPT1AP50416 AC092028.1-203ENST00000608262 953 ntBASIC26.73■■□□□ 1.87
CPT1AP50416 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CPT1AP50416 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CPT1AP50416 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CPT1AP50416 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.72■■□□□ 1.87
CPT1AP50416 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.72■■□□□ 1.87
CPT1AP50416 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.72■■□□□ 1.87
CPT1AP50416 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CPT1AP50416 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CPT1AP50416 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CPT1AP50416 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.71■■□□□ 1.87
CPT1AP50416 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CPT1AP50416 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CPT1AP50416 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
CPT1AP50416 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CPT1AP50416 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.7■■□□□ 1.87
CPT1AP50416 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CPT1AP50416 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CPT1AP50416 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.7■■□□□ 1.86
CPT1AP50416 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CPT1AP50416 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CPT1AP50416 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
CPT1AP50416 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.69■■□□□ 1.86
CPT1AP50416 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CPT1AP50416 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.69■■□□□ 1.86
CPT1AP50416 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CPT1AP50416 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
CPT1AP50416 AC011551.1-201ENST00000614101 683 ntBASIC26.69■■□□□ 1.86
CPT1AP50416 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
CPT1AP50416 AC142086.6-201ENST00000621154 1765 ntBASIC26.69■■□□□ 1.86
CPT1AP50416 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.68■■□□□ 1.86
CPT1AP50416 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.68■■□□□ 1.86
CPT1AP50416 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
CPT1AP50416 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.68■■□□□ 1.86
CPT1AP50416 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.68■■□□□ 1.86
CPT1AP50416 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CPT1AP50416 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.67■■□□□ 1.86
CPT1AP50416 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms