Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDC34P49427 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CDC34P49427 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC34P49427 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.75■□□□□ 0.59
CDC34P49427 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.75■□□□□ 0.59
CDC34P49427 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC34P49427 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC34P49427 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC34P49427 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC34P49427 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC34P49427 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.74■□□□□ 0.59
CDC34P49427 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC34P49427 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CDC34P49427 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CDC34P49427 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC34P49427 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CDC34P49427 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDC34P49427 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC34P49427 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC34P49427 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC34P49427 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.73■□□□□ 0.59
CDC34P49427 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.73■□□□□ 0.59
CDC34P49427 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC34P49427 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC34P49427 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC34P49427 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDC34P49427 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC34P49427 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CDC34P49427 LINC00543-201ENST00000567234 1845 ntBASIC18.72■□□□□ 0.59
CDC34P49427 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDC34P49427 SUZ12P1-203ENST00000578195 985 ntBASIC18.72■□□□□ 0.59
CDC34P49427 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CDC34P49427 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CDC34P49427 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDC34P49427 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDC34P49427 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.71■□□□□ 0.59
CDC34P49427 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDC34P49427 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDC34P49427 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDC34P49427 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDC34P49427 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDC34P49427 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDC34P49427 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDC34P49427 AC079834.2-201ENST00000609776 1949 ntBASIC18.7■□□□□ 0.58
CDC34P49427 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC34P49427 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDC34P49427 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CDC34P49427 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC34P49427 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.7■□□□□ 0.58
CDC34P49427 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC34P49427 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC34P49427 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.7■□□□□ 0.58
CDC34P49427 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC34P49427 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC34P49427 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC34P49427 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC34P49427 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDC34P49427 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDC34P49427 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDC34P49427 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.69■□□□□ 0.58
CDC34P49427 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.69■□□□□ 0.58
CDC34P49427 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.69■□□□□ 0.58
CDC34P49427 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC34P49427 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC34P49427 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC34P49427 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.68■□□□□ 0.58
CDC34P49427 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.68■□□□□ 0.58
CDC34P49427 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.68■□□□□ 0.58
CDC34P49427 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDC34P49427 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC34P49427 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CDC34P49427 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC34P49427 AC141586.4-201ENST00000624558 1573 ntBASIC18.68■□□□□ 0.58
CDC34P49427 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC34P49427 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC34P49427 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.67■□□□□ 0.58
CDC34P49427 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC34P49427 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC34P49427 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC34P49427 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC34P49427 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC34P49427 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CDC34P49427 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC34P49427 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC34P49427 DUSP8P5-201ENST00000422884 1815 ntBASIC18.66■□□□□ 0.58
CDC34P49427 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDC34P49427 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC34P49427 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDC34P49427 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC34P49427 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDC34P49427 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.66■□□□□ 0.58
CDC34P49427 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC34P49427 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.65■□□□□ 0.58
CDC34P49427 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.65■□□□□ 0.58
CDC34P49427 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC34P49427 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CDC34P49427 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC34P49427 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDC34P49427 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDC34P49427 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms