Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 RHO4YKR055W 876 nt5.05□□□□□ -1.6
CDC40P40968 KSH1YNL024C-A 219 nt5.05□□□□□ -1.6
CDC40P40968 PDR16YNL231C 1056 nt5.05□□□□□ -1.6
CDC40P40968 MPP10YJR002W 1782 nt5.05□□□□□ -1.6
CDC40P40968 HOF1YMR032W 2010 nt5.05□□□□□ -1.6
CDC40P40968 CLB1YGR108W 1416 nt5.05□□□□□ -1.6
CDC40P40968 SRV2YNL138W 1581 nt5.04□□□□□ -1.6
CDC40P40968 DBF2YGR092W 1719 nt5.04□□□□□ -1.6
CDC40P40968 PGK1YCR012W 1251 nt5.04□□□□□ -1.6
CDC40P40968 QCR8YJL166W 285 nt5.04□□□□□ -1.6
CDC40P40968 GTO3YMR251W 1101 nt5.04□□□□□ -1.6
CDC40P40968 YPR130CYPR130C 408 nt5.04□□□□□ -1.6
CDC40P40968 SSK22YCR073C 3996 nt5.04□□□□□ -1.6
CDC40P40968 SUM1YDR310C 3189 nt5.04□□□□□ -1.6
CDC40P40968 UGO1YDR470C 1509 nt5.03□□□□□ -1.6
CDC40P40968 AI5_BETAQ0075 1065 nt5.03□□□□□ -1.6
CDC40P40968 AGX1YFL030W 1158 nt5.03□□□□□ -1.6
CDC40P40968 YFR052C-AYFR052C-A 306 nt5.03□□□□□ -1.6
CDC40P40968 YAL019W-AYAL019W-A 570 nt5.03□□□□□ -1.6
CDC40P40968 AAD14YNL331C 1131 nt5.03□□□□□ -1.6
CDC40P40968 NRM1YNR009W 750 nt5.03□□□□□ -1.6
CDC40P40968 COQ1YBR003W 1422 nt5.03□□□□□ -1.6
CDC40P40968 PRT1YOR361C 2292 nt5.03□□□□□ -1.6
CDC40P40968 PRP40YKL012W 1752 nt5.02□□□□□ -1.61
CDC40P40968 PYC1YGL062W 3537 nt5.02□□□□□ -1.61
CDC40P40968 TRP1YDR007W 675 nt5.02□□□□□ -1.61
CDC40P40968 YEL009C-AYEL009C-A 408 nt5.02□□□□□ -1.61
CDC40P40968 TRR2YHR106W 1029 nt5.02□□□□□ -1.61
CDC40P40968 YHR140WYHR140W 720 nt5.02□□□□□ -1.61
CDC40P40968 YOX1YML027W 1158 nt5.02□□□□□ -1.61
CDC40P40968 YMR030W-AYMR030W-A 291 nt5.02□□□□□ -1.61
CDC40P40968 IES2YNL215W 963 nt5.02□□□□□ -1.61
CDC40P40968 YNL228WYNL228W 777 nt5.02□□□□□ -1.61
CDC40P40968 YPQ1YOL092W 927 nt5.02□□□□□ -1.61
CDC40P40968 ERG10YPL028W 1197 nt5.02□□□□□ -1.61
CDC40P40968 APE1YKL103C 1545 nt5.02□□□□□ -1.61
CDC40P40968 YIR007WYIR007W 2295 nt5.02□□□□□ -1.61
CDC40P40968 PYC2YBR218C 3543 nt5.01□□□□□ -1.61
CDC40P40968 VMA4YOR332W 702 nt5.01□□□□□ -1.61
CDC40P40968 VRP1YLR337C 2454 nt5.01□□□□□ -1.61
CDC40P40968 DBP9YLR276C 1785 nt5.01□□□□□ -1.61
CDC40P40968 ILV1YER086W 1731 nt5□□□□□ -1.61
CDC40P40968 CDC10YCR002C 969 nt5□□□□□ -1.61
CDC40P40968 LCP5YER127W 1074 nt5□□□□□ -1.61
CDC40P40968 YKL223WYKL223W 333 nt5□□□□□ -1.61
CDC40P40968 DID2YKR035W-A 615 nt5□□□□□ -1.61
CDC40P40968 YNR005CYNR005C 405 nt5□□□□□ -1.61
CDC40P40968 HTZ1YOL012C 405 nt5□□□□□ -1.61
CDC40P40968 EPS1YIL005W 2106 nt5□□□□□ -1.61
CDC40P40968 GAS3YMR215W 1575 nt4.99□□□□□ -1.61
CDC40P40968 GSY2YLR258W 2118 nt4.99□□□□□ -1.61
CDC40P40968 HED1YDR014W-A 489 nt4.99□□□□□ -1.61
CDC40P40968 CIA1YDR267C 993 nt4.99□□□□□ -1.61
CDC40P40968 CWC21YDR482C 408 nt4.99□□□□□ -1.61
CDC40P40968 YJR146WYJR146W 354 nt4.99□□□□□ -1.61
CDC40P40968 TMA46YOR091W 1038 nt4.99□□□□□ -1.61
CDC40P40968 SEC62YPL094C 825 nt4.99□□□□□ -1.61
CDC40P40968 SMX3YPR182W 261 nt4.99□□□□□ -1.61
CDC40P40968 RPL21AYBR191W 483 nt4.99□□□□□ -1.61
CDC40P40968 HXT5YHR096C 1779 nt4.99□□□□□ -1.61
CDC40P40968 MNN5YJL186W 1761 nt4.99□□□□□ -1.61
CDC40P40968 YMD8YML038C 1329 nt4.98□□□□□ -1.61
CDC40P40968 UPS3YDR185C 540 nt4.98□□□□□ -1.61
CDC40P40968 ASP1YDR321W 1146 nt4.98□□□□□ -1.61
CDC40P40968 RPL12AYEL054C 498 nt4.98□□□□□ -1.61
CDC40P40968 URA1YKL216W 945 nt4.98□□□□□ -1.61
CDC40P40968 OGG1YML060W 1131 nt4.98□□□□□ -1.61
CDC40P40968 RFC4YOL094C 972 nt4.98□□□□□ -1.61
CDC40P40968 YOL163WYOL163W 510 nt4.98□□□□□ -1.61
CDC40P40968 MBF1YOR298C-A 456 nt4.98□□□□□ -1.61
CDC40P40968 CPA1YOR303W 1236 nt4.98□□□□□ -1.61
CDC40P40968 PDR18YNR070W 4002 nt4.98□□□□□ -1.61
CDC40P40968 DUR1,2YBR208C 5508 nt4.98□□□□□ -1.61
CDC40P40968 HRQ1YDR291W 3234 nt4.97□□□□□ -1.61
CDC40P40968 APE4YHR113W 1473 nt4.97□□□□□ -1.61
CDC40P40968 HMLALPHA1YCL066W 528 nt4.97□□□□□ -1.61
CDC40P40968 MATALPHA1YCR040W 528 nt4.97□□□□□ -1.61
CDC40P40968 SEC13YLR208W 894 nt4.97□□□□□ -1.61
CDC40P40968 CST26YBR042C 1194 nt4.97□□□□□ -1.61
CDC40P40968 snR30snR30 606 nt4.97□□□□□ -1.61
CDC40P40968 YCL049CYCL049C 939 nt4.97□□□□□ -1.61
CDC40P40968 CST6YIL036W 1764 nt4.96□□□□□ -1.61
CDC40P40968 TUP1YCR084C 2142 nt4.96□□□□□ -1.62
CDC40P40968 MCH1YDL054C 1461 nt4.96□□□□□ -1.62
CDC40P40968 RPS16BYDL083C 432 nt4.96□□□□□ -1.62
CDC40P40968 PDA1YER178W 1263 nt4.96□□□□□ -1.62
CDC40P40968 ADD37YMR184W 597 nt4.96□□□□□ -1.62
CDC40P40968 SCO2YBR024W 906 nt4.96□□□□□ -1.62
CDC40P40968 NGL2YMR285C 1548 nt4.96□□□□□ -1.62
CDC40P40968 RIM101YHL027W 1878 nt4.96□□□□□ -1.62
CDC40P40968 ARN2YHL047C 1863 nt4.96□□□□□ -1.62
CDC40P40968 YGR054WYGR054W 1929 nt4.95□□□□□ -1.62
CDC40P40968 DOT1YDR440W 1749 nt4.95□□□□□ -1.62
CDC40P40968 YTA12YMR089C 2478 nt4.95□□□□□ -1.62
CDC40P40968 PHM8YER037W 966 nt4.95□□□□□ -1.62
CDC40P40968 SKI6YGR195W 741 nt4.95□□□□□ -1.62
CDC40P40968 PRI1YIR008C 1230 nt4.95□□□□□ -1.62
CDC40P40968 RPE1YJL121C 717 nt4.95□□□□□ -1.62
CDC40P40968 SRY1YKL218C 981 nt4.95□□□□□ -1.62
CDC40P40968 COS10YNR075W 1125 nt4.95□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 32.2 ms