Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ATP6V1AP38606 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.94■■■□□ 2.54
ATP6V1AP38606 RPP21-222ENST00000433076 577 ntTSL 2 BASIC30.94■■■□□ 2.54
ATP6V1AP38606 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC30.94■■■□□ 2.54
ATP6V1AP38606 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.94■■■□□ 2.54
ATP6V1AP38606 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ATP6V1AP38606 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
ATP6V1AP38606 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ATP6V1AP38606 LINC01003-201ENST00000564834 1764 ntBASIC30.94■■■□□ 2.54
ATP6V1AP38606 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
ATP6V1AP38606 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
ATP6V1AP38606 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC30.93■■■□□ 2.54
ATP6V1AP38606 RALB-208ENST00000631312 311 ntTSL 5 BASIC30.93■■■□□ 2.54
ATP6V1AP38606 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
ATP6V1AP38606 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.93■■■□□ 2.54
ATP6V1AP38606 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.92■■■□□ 2.54
ATP6V1AP38606 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.92■■■□□ 2.54
ATP6V1AP38606 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ATP6V1AP38606 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ATP6V1AP38606 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ATP6V1AP38606 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.91■■■□□ 2.54
ATP6V1AP38606 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
ATP6V1AP38606 MIR4281-201ENST00000580852 62 ntBASIC30.91■■■□□ 2.54
ATP6V1AP38606 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC30.91■■■□□ 2.54
ATP6V1AP38606 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
ATP6V1AP38606 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC30.9■■■□□ 2.54
ATP6V1AP38606 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
ATP6V1AP38606 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
ATP6V1AP38606 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
ATP6V1AP38606 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.89■■■□□ 2.54
ATP6V1AP38606 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
ATP6V1AP38606 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC30.89■■■□□ 2.54
ATP6V1AP38606 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.89■■■□□ 2.54
ATP6V1AP38606 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
ATP6V1AP38606 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
ATP6V1AP38606 AL136116.3-201ENST00000402907 1138 ntBASIC30.88■■■□□ 2.53
ATP6V1AP38606 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
ATP6V1AP38606 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.87■■■□□ 2.53
ATP6V1AP38606 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
ATP6V1AP38606 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.86■■■□□ 2.53
ATP6V1AP38606 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
ATP6V1AP38606 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
ATP6V1AP38606 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
ATP6V1AP38606 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
ATP6V1AP38606 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.85■■■□□ 2.53
ATP6V1AP38606 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
ATP6V1AP38606 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
ATP6V1AP38606 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
ATP6V1AP38606 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC30.85■■■□□ 2.53
ATP6V1AP38606 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.85■■■□□ 2.53
ATP6V1AP38606 AC010997.5-201ENST00000609182 354 ntBASIC30.85■■■□□ 2.53
ATP6V1AP38606 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
ATP6V1AP38606 AL117332.1-201ENST00000622628 974 ntBASIC30.85■■■□□ 2.53
ATP6V1AP38606 AC142472.1-201ENST00000612013 1741 ntBASIC30.84■■■□□ 2.53
ATP6V1AP38606 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC30.84■■■□□ 2.53
ATP6V1AP38606 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.83■■■□□ 2.53
ATP6V1AP38606 AC139426.1-201ENST00000568218 2529 ntBASIC30.83■■■□□ 2.53
ATP6V1AP38606 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.83■■■□□ 2.53
ATP6V1AP38606 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.83■■■□□ 2.53
ATP6V1AP38606 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.83■■■□□ 2.53
ATP6V1AP38606 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
ATP6V1AP38606 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC30.82■■■□□ 2.52
ATP6V1AP38606 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
ATP6V1AP38606 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
ATP6V1AP38606 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
ATP6V1AP38606 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC30.81■■■□□ 2.52
ATP6V1AP38606 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ATP6V1AP38606 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC30.81■■■□□ 2.52
ATP6V1AP38606 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC30.81■■■□□ 2.52
ATP6V1AP38606 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC30.81■■■□□ 2.52
ATP6V1AP38606 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ATP6V1AP38606 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
ATP6V1AP38606 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
ATP6V1AP38606 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.8■■■□□ 2.52
ATP6V1AP38606 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
ATP6V1AP38606 MIR3621-201ENST00000580529 85 ntBASIC30.8■■■□□ 2.52
ATP6V1AP38606 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
ATP6V1AP38606 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
ATP6V1AP38606 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
ATP6V1AP38606 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
ATP6V1AP38606 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC30.79■■■□□ 2.52
ATP6V1AP38606 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC30.79■■■□□ 2.52
ATP6V1AP38606 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC30.79■■■□□ 2.52
ATP6V1AP38606 AC110285.6-201ENST00000617652 491 ntBASIC30.79■■■□□ 2.52
ATP6V1AP38606 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
ATP6V1AP38606 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.78■■■□□ 2.52
ATP6V1AP38606 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.78■■■□□ 2.52
ATP6V1AP38606 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC30.78■■■□□ 2.52
ATP6V1AP38606 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC30.78■■■□□ 2.52
ATP6V1AP38606 MIR6724-1-201ENST00000616420 92 ntBASIC30.78■■■□□ 2.52
ATP6V1AP38606 MIR6724-2-201ENST00000616483 92 ntBASIC30.78■■■□□ 2.52
ATP6V1AP38606 MIR6724-4-201ENST00000617390 92 ntBASIC30.78■■■□□ 2.52
ATP6V1AP38606 MIR6724-3-201ENST00000622482 92 ntBASIC30.78■■■□□ 2.52
ATP6V1AP38606 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ATP6V1AP38606 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.77■■■□□ 2.52
ATP6V1AP38606 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
ATP6V1AP38606 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ATP6V1AP38606 MTDHP2-201ENST00000601468 714 ntBASIC30.77■■■□□ 2.52
ATP6V1AP38606 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
ATP6V1AP38606 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms