Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
HMGCLP35914 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
HMGCLP35914 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.89■■□□□ 1.41
HMGCLP35914 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
HMGCLP35914 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
HMGCLP35914 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HMGCLP35914 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HMGCLP35914 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.87■■□□□ 1.41
HMGCLP35914 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HMGCLP35914 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HMGCLP35914 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
HMGCLP35914 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HMGCLP35914 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HMGCLP35914 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HMGCLP35914 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
HMGCLP35914 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.85■■□□□ 1.41
HMGCLP35914 AC004987.1-201ENST00000428627 508 ntBASIC23.85■■□□□ 1.41
HMGCLP35914 ATP5G2P3-201ENST00000429083 425 ntBASIC23.85■■□□□ 1.41
HMGCLP35914 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
HMGCLP35914 RPS2P7-201ENST00000447334 885 ntBASIC23.85■■□□□ 1.41
HMGCLP35914 AC012354.3-201ENST00000623734 483 ntBASIC23.85■■□□□ 1.41
HMGCLP35914 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.84■■□□□ 1.41
HMGCLP35914 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.84■■□□□ 1.41
HMGCLP35914 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HMGCLP35914 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.84■■□□□ 1.41
HMGCLP35914 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
HMGCLP35914 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
HMGCLP35914 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HMGCLP35914 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.83■■□□□ 1.41
HMGCLP35914 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HMGCLP35914 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HMGCLP35914 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
HMGCLP35914 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
HMGCLP35914 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.83■■□□□ 1.41
HMGCLP35914 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.83■■□□□ 1.41
HMGCLP35914 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.83■■□□□ 1.41
HMGCLP35914 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.83■■□□□ 1.41
HMGCLP35914 AC087393.1-201ENST00000582896 145 ntBASIC23.83■■□□□ 1.41
HMGCLP35914 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
HMGCLP35914 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HMGCLP35914 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HMGCLP35914 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
HMGCLP35914 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
HMGCLP35914 TSPY13P-201ENST00000338964 914 ntBASIC23.82■■□□□ 1.4
HMGCLP35914 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HMGCLP35914 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HMGCLP35914 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HMGCLP35914 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.81■■□□□ 1.4
HMGCLP35914 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
HMGCLP35914 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.81■■□□□ 1.4
HMGCLP35914 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HMGCLP35914 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
HMGCLP35914 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HMGCLP35914 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HMGCLP35914 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HMGCLP35914 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HMGCLP35914 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HMGCLP35914 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HMGCLP35914 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
HMGCLP35914 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.8■■□□□ 1.4
HMGCLP35914 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
HMGCLP35914 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.8■■□□□ 1.4
HMGCLP35914 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HMGCLP35914 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HMGCLP35914 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HMGCLP35914 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.8■■□□□ 1.4
HMGCLP35914 DUX4L18-201ENST00000553347 1267 ntBASIC23.8■■□□□ 1.4
HMGCLP35914 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HMGCLP35914 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HMGCLP35914 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HMGCLP35914 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.79■■□□□ 1.4
HMGCLP35914 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.79■■□□□ 1.4
HMGCLP35914 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.78■■□□□ 1.4
HMGCLP35914 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HMGCLP35914 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
HMGCLP35914 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
HMGCLP35914 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HMGCLP35914 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HMGCLP35914 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.77■■□□□ 1.4
HMGCLP35914 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HMGCLP35914 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HMGCLP35914 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HMGCLP35914 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
HMGCLP35914 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
HMGCLP35914 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HMGCLP35914 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.76■■□□□ 1.39
HMGCLP35914 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HMGCLP35914 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HMGCLP35914 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.76■■□□□ 1.39
HMGCLP35914 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
HMGCLP35914 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HMGCLP35914 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HMGCLP35914 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HMGCLP35914 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
HMGCLP35914 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HMGCLP35914 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HMGCLP35914 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.76■■□□□ 1.39
HMGCLP35914 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HMGCLP35914 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HMGCLP35914 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms