Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HIST1H1CP16403 AC025884.2-201ENST00000553429 711 ntBASIC21.42■■□□□ 1.02
HIST1H1CP16403 AC060814.1-201ENST00000554326 538 ntBASIC21.42■■□□□ 1.02
HIST1H1CP16403 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HIST1H1CP16403 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HIST1H1CP16403 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIST1H1CP16403 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIST1H1CP16403 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIST1H1CP16403 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIST1H1CP16403 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIST1H1CP16403 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.41■■□□□ 1.02
HIST1H1CP16403 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
HIST1H1CP16403 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HIST1H1CP16403 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIST1H1CP16403 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.4■■□□□ 1.02
HIST1H1CP16403 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.4■■□□□ 1.02
HIST1H1CP16403 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HIST1H1CP16403 SLC6A10P-202ENST00000431994 2058 ntBASIC21.4■■□□□ 1.02
HIST1H1CP16403 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HIST1H1CP16403 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HIST1H1CP16403 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HIST1H1CP16403 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H1CP16403 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H1CP16403 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.38■■□□□ 1.01
HIST1H1CP16403 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.38■■□□□ 1.01
HIST1H1CP16403 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H1CP16403 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H1CP16403 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H1CP16403 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H1CP16403 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.38■■□□□ 1.01
HIST1H1CP16403 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
HIST1H1CP16403 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.37■■□□□ 1.01
HIST1H1CP16403 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HIST1H1CP16403 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HIST1H1CP16403 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HIST1H1CP16403 MIR3960-201ENST00000583311 91 ntBASIC21.36■■□□□ 1.01
HIST1H1CP16403 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIST1H1CP16403 SMPD5-203ENST00000639008 1464 ntBASIC21.36■■□□□ 1.01
HIST1H1CP16403 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
HIST1H1CP16403 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIST1H1CP16403 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIST1H1CP16403 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HIST1H1CP16403 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.36■■□□□ 1.01
HIST1H1CP16403 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIST1H1CP16403 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIST1H1CP16403 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
HIST1H1CP16403 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.35■■□□□ 1.01
HIST1H1CP16403 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
HIST1H1CP16403 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.35■■□□□ 1.01
HIST1H1CP16403 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.35■■□□□ 1.01
HIST1H1CP16403 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
HIST1H1CP16403 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIST1H1CP16403 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HIST1H1CP16403 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HIST1H1CP16403 MIR639-201ENST00000384974 98 ntBASIC21.34■■□□□ 1.01
HIST1H1CP16403 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.34■■□□□ 1.01
HIST1H1CP16403 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.34■■□□□ 1.01
HIST1H1CP16403 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
HIST1H1CP16403 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HIST1H1CP16403 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HIST1H1CP16403 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HIST1H1CP16403 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.34■■□□□ 1.01
HIST1H1CP16403 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
HIST1H1CP16403 AC092296.2-201ENST00000589470 999 ntBASIC21.33■■□□□ 1.01
HIST1H1CP16403 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
HIST1H1CP16403 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HIST1H1CP16403 AP003733.4-201ENST00000623785 1697 ntBASIC21.32■■□□□ 1
HIST1H1CP16403 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.32■■□□□ 1
HIST1H1CP16403 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.32■■□□□ 1
HIST1H1CP16403 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
HIST1H1CP16403 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HIST1H1CP16403 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
HIST1H1CP16403 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.31■■□□□ 1
HIST1H1CP16403 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HIST1H1CP16403 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HIST1H1CP16403 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
HIST1H1CP16403 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HIST1H1CP16403 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HIST1H1CP16403 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
HIST1H1CP16403 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.3■■□□□ 1
HIST1H1CP16403 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.3■■□□□ 1
HIST1H1CP16403 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.3■■□□□ 1
HIST1H1CP16403 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
HIST1H1CP16403 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.29■■□□□ 1
HIST1H1CP16403 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.29■■□□□ 1
HIST1H1CP16403 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HIST1H1CP16403 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HIST1H1CP16403 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HIST1H1CP16403 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.28■■□□□ 1
HIST1H1CP16403 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HIST1H1CP16403 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.28■■□□□ 1
HIST1H1CP16403 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.28■■□□□ 1
HIST1H1CP16403 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.28■■□□□ 1
HIST1H1CP16403 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.28■■□□□ 1
HIST1H1CP16403 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
HIST1H1CP16403 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.28■■□□□ 1
HIST1H1CP16403 LINC01124-201ENST00000409786 2117 ntBASIC21.28■■□□□ 1
HIST1H1CP16403 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.28■■□□□ 1
HIST1H1CP16403 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
HIST1H1CP16403 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms