Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD28P10747 AL592295.1-201ENST00000400984 884 ntBASIC18.67■□□□□ 0.58
CD28P10747 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.67■□□□□ 0.58
CD28P10747 AL356441.2-201ENST00000443009 864 ntBASIC18.67■□□□□ 0.58
CD28P10747 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.67■□□□□ 0.58
CD28P10747 AC022616.5-201ENST00000518796 181 ntBASIC18.67■□□□□ 0.58
CD28P10747 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.67■□□□□ 0.58
CD28P10747 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD28P10747 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD28P10747 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD28P10747 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD28P10747 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD28P10747 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD28P10747 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD28P10747 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD28P10747 Z92544.1-202ENST00000571933 1220 ntBASIC18.66■□□□□ 0.58
CD28P10747 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.66■□□□□ 0.58
CD28P10747 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.66■□□□□ 0.58
CD28P10747 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD28P10747 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD28P10747 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD28P10747 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD28P10747 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.65■□□□□ 0.58
CD28P10747 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD28P10747 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
CD28P10747 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CD28P10747 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CD28P10747 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD28P10747 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CD28P10747 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.64■□□□□ 0.57
CD28P10747 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD28P10747 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CD28P10747 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.64■□□□□ 0.57
CD28P10747 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CD28P10747 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CD28P10747 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD28P10747 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD28P10747 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.64■□□□□ 0.57
CD28P10747 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD28P10747 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD28P10747 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD28P10747 KRT125P-201ENST00000546827 989 ntBASIC18.63■□□□□ 0.57
CD28P10747 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CD28P10747 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD28P10747 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD28P10747 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD28P10747 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CD28P10747 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CD28P10747 BX664725.1-201ENST00000438252 379 ntBASIC18.62■□□□□ 0.57
CD28P10747 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CD28P10747 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.62■□□□□ 0.57
CD28P10747 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD28P10747 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.62■□□□□ 0.57
CD28P10747 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD28P10747 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD28P10747 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD28P10747 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD28P10747 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.61■□□□□ 0.57
CD28P10747 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CD28P10747 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD28P10747 KRT18P24-201ENST00000344739 1156 ntBASIC18.61■□□□□ 0.57
CD28P10747 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.61■□□□□ 0.57
CD28P10747 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD28P10747 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CD28P10747 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.61■□□□□ 0.57
CD28P10747 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.61■□□□□ 0.57
CD28P10747 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD28P10747 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CD28P10747 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CD28P10747 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD28P10747 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CD28P10747 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.6■□□□□ 0.57
CD28P10747 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD28P10747 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.6■□□□□ 0.57
CD28P10747 MIR4787-201ENST00000607364 84 ntBASIC18.6■□□□□ 0.57
CD28P10747 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.6■□□□□ 0.57
CD28P10747 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CD28P10747 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD28P10747 AC120024.1-201ENST00000562672 995 ntBASIC18.59■□□□□ 0.57
CD28P10747 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.59■□□□□ 0.57
CD28P10747 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD28P10747 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD28P10747 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD28P10747 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD28P10747 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.59■□□□□ 0.57
CD28P10747 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
CD28P10747 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.57
CD28P10747 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD28P10747 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD28P10747 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD28P10747 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD28P10747 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD28P10747 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD28P10747 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CD28P10747 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CD28P10747 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CD28P10747 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.57■□□□□ 0.56
CD28P10747 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.57■□□□□ 0.56
CD28P10747 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD28P10747 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms