Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
SP9P0CG40 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SP9P0CG40 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SP9P0CG40 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SP9P0CG40 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.09■■□□□ 1.45
SP9P0CG40 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.09■■□□□ 1.45
SP9P0CG40 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.09■■□□□ 1.45
SP9P0CG40 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.09■■□□□ 1.45
SP9P0CG40 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SP9P0CG40 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
SP9P0CG40 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
SP9P0CG40 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SP9P0CG40 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.07■■□□□ 1.44
SP9P0CG40 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.07■■□□□ 1.44
SP9P0CG40 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.07■■□□□ 1.44
SP9P0CG40 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.07■■□□□ 1.44
SP9P0CG40 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.07■■□□□ 1.44
SP9P0CG40 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SP9P0CG40 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.06■■□□□ 1.44
SP9P0CG40 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
SP9P0CG40 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.06■■□□□ 1.44
SP9P0CG40 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.06■■□□□ 1.44
SP9P0CG40 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.06■■□□□ 1.44
SP9P0CG40 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.06■■□□□ 1.44
SP9P0CG40 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.06■■□□□ 1.44
SP9P0CG40 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
SP9P0CG40 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
SP9P0CG40 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.05■■□□□ 1.44
SP9P0CG40 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
SP9P0CG40 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.05■■□□□ 1.44
SP9P0CG40 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
SP9P0CG40 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.05■■□□□ 1.44
SP9P0CG40 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
SP9P0CG40 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SP9P0CG40 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SP9P0CG40 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
SP9P0CG40 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
SP9P0CG40 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.04■■□□□ 1.44
SP9P0CG40 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
SP9P0CG40 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.04■■□□□ 1.44
SP9P0CG40 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SP9P0CG40 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
SP9P0CG40 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
SP9P0CG40 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.03■■□□□ 1.44
SP9P0CG40 SUDS3P1-201ENST00000505831 966 ntBASIC24.03■■□□□ 1.44
SP9P0CG40 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SP9P0CG40 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.03■■□□□ 1.44
SP9P0CG40 AL031432.3-201ENST00000607698 485 ntBASIC24.03■■□□□ 1.44
SP9P0CG40 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
SP9P0CG40 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SP9P0CG40 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
SP9P0CG40 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SP9P0CG40 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.02■■□□□ 1.44
SP9P0CG40 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SP9P0CG40 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
SP9P0CG40 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SP9P0CG40 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.01■■□□□ 1.43
SP9P0CG40 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SP9P0CG40 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.01■■□□□ 1.43
SP9P0CG40 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SP9P0CG40 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SP9P0CG40 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.01■■□□□ 1.43
SP9P0CG40 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24■■□□□ 1.43
SP9P0CG40 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24■■□□□ 1.43
SP9P0CG40 UNC93B3-201ENST00000308076 687 ntBASIC23.99■■□□□ 1.43
SP9P0CG40 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.99■■□□□ 1.43
SP9P0CG40 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.99■■□□□ 1.43
SP9P0CG40 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SP9P0CG40 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.99■■□□□ 1.43
SP9P0CG40 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.99■■□□□ 1.43
SP9P0CG40 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.99■■□□□ 1.43
SP9P0CG40 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SP9P0CG40 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.98■■□□□ 1.43
SP9P0CG40 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
SP9P0CG40 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.98■■□□□ 1.43
SP9P0CG40 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SP9P0CG40 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SP9P0CG40 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
SP9P0CG40 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
SP9P0CG40 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.97■■□□□ 1.43
SP9P0CG40 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SP9P0CG40 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.96■■□□□ 1.43
SP9P0CG40 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.96■■□□□ 1.43
SP9P0CG40 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.96■■□□□ 1.43
SP9P0CG40 AL136162.1-201ENST00000607711 1078 ntBASIC23.96■■□□□ 1.43
SP9P0CG40 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.96■■□□□ 1.43
SP9P0CG40 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.96■■□□□ 1.43
SP9P0CG40 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.96■■□□□ 1.43
SP9P0CG40 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SP9P0CG40 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.96■■□□□ 1.43
SP9P0CG40 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SP9P0CG40 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SP9P0CG40 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SP9P0CG40 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SP9P0CG40 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SP9P0CG40 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SP9P0CG40 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.94■■□□□ 1.42
SP9P0CG40 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SP9P0CG40 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
SP9P0CG40 AC011551.1-201ENST00000614101 683 ntBASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms