Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
HTR1AP08908 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HTR1AP08908 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
HTR1AP08908 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
HTR1AP08908 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.75■■□□□ 1.07
HTR1AP08908 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.75■■□□□ 1.07
HTR1AP08908 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HTR1AP08908 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.74■■□□□ 1.07
HTR1AP08908 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTR1AP08908 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HTR1AP08908 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HTR1AP08908 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.74■■□□□ 1.07
HTR1AP08908 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTR1AP08908 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTR1AP08908 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTR1AP08908 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1AP08908 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1AP08908 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1AP08908 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1AP08908 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1AP08908 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1AP08908 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1AP08908 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HTR1AP08908 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HTR1AP08908 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HTR1AP08908 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
HTR1AP08908 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HTR1AP08908 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HTR1AP08908 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
HTR1AP08908 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HTR1AP08908 AP006261.1-201ENST00000584783 668 ntBASIC21.72■■□□□ 1.07
HTR1AP08908 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HTR1AP08908 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HTR1AP08908 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1AP08908 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1AP08908 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1AP08908 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
HTR1AP08908 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1AP08908 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.71■■□□□ 1.07
HTR1AP08908 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.71■■□□□ 1.07
HTR1AP08908 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1AP08908 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
HTR1AP08908 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HTR1AP08908 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1AP08908 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1AP08908 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1AP08908 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1AP08908 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1AP08908 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.7■■□□□ 1.06
HTR1AP08908 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1AP08908 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1AP08908 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.7■■□□□ 1.06
HTR1AP08908 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1AP08908 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1AP08908 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1AP08908 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.7■■□□□ 1.06
HTR1AP08908 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HTR1AP08908 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
HTR1AP08908 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR1AP08908 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HTR1AP08908 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.69■■□□□ 1.06
HTR1AP08908 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HTR1AP08908 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
HTR1AP08908 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HTR1AP08908 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
HTR1AP08908 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HTR1AP08908 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
HTR1AP08908 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HTR1AP08908 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HTR1AP08908 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
HTR1AP08908 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HTR1AP08908 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.67■■□□□ 1.06
HTR1AP08908 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.67■■□□□ 1.06
HTR1AP08908 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.67■■□□□ 1.06
HTR1AP08908 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTR1AP08908 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTR1AP08908 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
HTR1AP08908 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HTR1AP08908 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HTR1AP08908 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTR1AP08908 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.66■■□□□ 1.06
HTR1AP08908 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.66■■□□□ 1.06
HTR1AP08908 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HTR1AP08908 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HTR1AP08908 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTR1AP08908 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HTR1AP08908 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HTR1AP08908 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HTR1AP08908 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
HTR1AP08908 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTR1AP08908 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HTR1AP08908 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.65■■□□□ 1.06
HTR1AP08908 AC087741.3-201ENST00000624270 1347 ntBASIC21.65■■□□□ 1.06
HTR1AP08908 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HTR1AP08908 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTR1AP08908 C9orf163-202ENST00000624034 2573 ntBASIC21.65■■□□□ 1.06
HTR1AP08908 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTR1AP08908 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HTR1AP08908 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
HTR1AP08908 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms