Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
VTNP04004 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.41■■□□□ 1.82
VTNP04004 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.41■■□□□ 1.82
VTNP04004 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.4■■□□□ 1.82
VTNP04004 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
VTNP04004 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.4■■□□□ 1.82
VTNP04004 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
VTNP04004 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.4■■□□□ 1.82
VTNP04004 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
VTNP04004 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
VTNP04004 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
VTNP04004 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
VTNP04004 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
VTNP04004 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
VTNP04004 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
VTNP04004 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
VTNP04004 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.39■■□□□ 1.82
VTNP04004 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
VTNP04004 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
VTNP04004 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
VTNP04004 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
VTNP04004 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.39■■□□□ 1.82
VTNP04004 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.38■■□□□ 1.81
VTNP04004 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
VTNP04004 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
VTNP04004 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
VTNP04004 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.38■■□□□ 1.81
VTNP04004 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
VTNP04004 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
VTNP04004 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
VTNP04004 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
VTNP04004 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
VTNP04004 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
VTNP04004 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
VTNP04004 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
VTNP04004 GUSBP5-201ENST00000418136 578 ntBASIC26.36■■□□□ 1.81
VTNP04004 AC022616.5-201ENST00000518796 181 ntBASIC26.36■■□□□ 1.81
VTNP04004 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.36■■□□□ 1.81
VTNP04004 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
VTNP04004 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
VTNP04004 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
VTNP04004 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
VTNP04004 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.35■■□□□ 1.81
VTNP04004 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
VTNP04004 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.34■■□□□ 1.81
VTNP04004 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
VTNP04004 AC239859.2-201ENST00000444165 318 ntBASIC26.34■■□□□ 1.81
VTNP04004 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.34■■□□□ 1.81
VTNP04004 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.34■■□□□ 1.81
VTNP04004 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
VTNP04004 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.33■■□□□ 1.81
VTNP04004 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.33■■□□□ 1.81
VTNP04004 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.33■■□□□ 1.81
VTNP04004 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
VTNP04004 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
VTNP04004 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.32■■□□□ 1.8
VTNP04004 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.32■■□□□ 1.8
VTNP04004 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.32■■□□□ 1.8
VTNP04004 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
VTNP04004 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
VTNP04004 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VTNP04004 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.3■■□□□ 1.8
VTNP04004 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VTNP04004 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VTNP04004 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.29■■□□□ 1.8
VTNP04004 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.29■■□□□ 1.8
VTNP04004 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VTNP04004 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.29■■□□□ 1.8
VTNP04004 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
VTNP04004 KRT18P24-201ENST00000344739 1156 ntBASIC26.28■■□□□ 1.8
VTNP04004 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.28■■□□□ 1.8
VTNP04004 THA1P-201ENST00000590384 1145 ntBASIC26.28■■□□□ 1.8
VTNP04004 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
VTNP04004 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.28■■□□□ 1.8
VTNP04004 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
VTNP04004 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
VTNP04004 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
VTNP04004 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
VTNP04004 AC120024.1-201ENST00000562672 995 ntBASIC26.27■■□□□ 1.8
VTNP04004 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
VTNP04004 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
VTNP04004 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
VTNP04004 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
VTNP04004 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
VTNP04004 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
VTNP04004 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
VTNP04004 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
VTNP04004 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.26■■□□□ 1.79
VTNP04004 ERN1-208ENST00000606895 2068 ntBASIC26.26■■□□□ 1.79
VTNP04004 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.25■■□□□ 1.79
VTNP04004 AL121749.1-202ENST00000609313 2153 ntBASIC26.25■■□□□ 1.79
VTNP04004 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
VTNP04004 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.25■■□□□ 1.79
VTNP04004 Z92544.1-202ENST00000571933 1220 ntBASIC26.25■■□□□ 1.79
VTNP04004 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
VTNP04004 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
VTNP04004 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
VTNP04004 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.24■■□□□ 1.79
VTNP04004 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
VTNP04004 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms