Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.32■□□□□ 0.68
APOC3P02656 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOC3P02656 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOC3P02656 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
APOC3P02656 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
APOC3P02656 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOC3P02656 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APOC3P02656 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.31■□□□□ 0.68
APOC3P02656 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APOC3P02656 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
APOC3P02656 AP004609.3-201ENST00000610705 1884 ntBASIC19.31■□□□□ 0.68
APOC3P02656 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
APOC3P02656 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
APOC3P02656 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
APOC3P02656 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
APOC3P02656 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APOC3P02656 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.3■□□□□ 0.68
APOC3P02656 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.3■□□□□ 0.68
APOC3P02656 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
APOC3P02656 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APOC3P02656 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APOC3P02656 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
APOC3P02656 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APOC3P02656 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APOC3P02656 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
APOC3P02656 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APOC3P02656 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APOC3P02656 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APOC3P02656 EP400NL-214ENST00000641289 2402 ntBASIC19.29■□□□□ 0.68
APOC3P02656 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APOC3P02656 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APOC3P02656 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APOC3P02656 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
APOC3P02656 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
APOC3P02656 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
APOC3P02656 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
APOC3P02656 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
APOC3P02656 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APOC3P02656 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APOC3P02656 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APOC3P02656 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
APOC3P02656 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
APOC3P02656 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
APOC3P02656 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
APOC3P02656 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
APOC3P02656 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOC3P02656 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOC3P02656 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.26■□□□□ 0.67
APOC3P02656 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOC3P02656 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOC3P02656 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
APOC3P02656 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APOC3P02656 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APOC3P02656 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOC3P02656 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOC3P02656 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOC3P02656 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APOC3P02656 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.25■□□□□ 0.67
APOC3P02656 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOC3P02656 AC096887.2-201ENST00000623443 1957 ntBASIC19.24■□□□□ 0.67
APOC3P02656 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.24■□□□□ 0.67
APOC3P02656 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APOC3P02656 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOC3P02656 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOC3P02656 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOC3P02656 AL121603.2-201ENST00000557373 2117 ntBASIC19.24■□□□□ 0.67
APOC3P02656 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
APOC3P02656 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
APOC3P02656 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.23■□□□□ 0.67
APOC3P02656 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
APOC3P02656 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOC3P02656 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.22■□□□□ 0.67
APOC3P02656 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APOC3P02656 ABCB10P4-201ENST00000566803 2184 ntBASIC19.22■□□□□ 0.67
APOC3P02656 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOC3P02656 AC015813.7-201ENST00000623294 581 ntBASIC19.22■□□□□ 0.67
APOC3P02656 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOC3P02656 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
APOC3P02656 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APOC3P02656 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOC3P02656 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
APOC3P02656 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOC3P02656 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APOC3P02656 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.2■□□□□ 0.66
APOC3P02656 AC018358.1-201ENST00000631079 1402 ntBASIC19.2■□□□□ 0.66
APOC3P02656 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
APOC3P02656 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.2■□□□□ 0.66
APOC3P02656 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOC3P02656 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APOC3P02656 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APOC3P02656 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOC3P02656 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
APOC3P02656 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APOC3P02656 AC010501.1-201ENST00000606270 1962 ntBASIC19.19■□□□□ 0.66
APOC3P02656 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
APOC3P02656 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOC3P02656 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
APOC3P02656 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOC3P02656 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOC3P02656 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms