Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NGFP01138 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NGFP01138 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NGFP01138 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NGFP01138 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NGFP01138 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.68■□□□□ 0.9
NGFP01138 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NGFP01138 DUX4L9-201ENST00000449051 1259 ntBASIC20.68■□□□□ 0.9
NGFP01138 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.68■□□□□ 0.9
NGFP01138 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NGFP01138 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NGFP01138 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NGFP01138 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NGFP01138 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NGFP01138 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NGFP01138 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NGFP01138 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
NGFP01138 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.67■□□□□ 0.9
NGFP01138 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NGFP01138 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NGFP01138 AC018755.3-202ENST00000596210 929 ntBASIC20.66■□□□□ 0.9
NGFP01138 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
NGFP01138 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.66■□□□□ 0.9
NGFP01138 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.66■□□□□ 0.9
NGFP01138 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.65■□□□□ 0.9
NGFP01138 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NGFP01138 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NGFP01138 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NGFP01138 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NGFP01138 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NGFP01138 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
NGFP01138 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
NGFP01138 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NGFP01138 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NGFP01138 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NGFP01138 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NGFP01138 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.64■□□□□ 0.89
NGFP01138 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.64■□□□□ 0.89
NGFP01138 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NGFP01138 AC097639.1-201ENST00000565519 1891 ntBASIC20.64■□□□□ 0.89
NGFP01138 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NGFP01138 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NGFP01138 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NGFP01138 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.64■□□□□ 0.89
NGFP01138 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NGFP01138 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.63■□□□□ 0.89
NGFP01138 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NGFP01138 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NGFP01138 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NGFP01138 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NGFP01138 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NGFP01138 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NGFP01138 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NGFP01138 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NGFP01138 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NGFP01138 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NGFP01138 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NGFP01138 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.62■□□□□ 0.89
NGFP01138 MIR6765-201ENST00000614092 87 ntBASIC20.62■□□□□ 0.89
NGFP01138 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NGFP01138 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NGFP01138 DUX4L18-201ENST00000553347 1267 ntBASIC20.61■□□□□ 0.89
NGFP01138 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NGFP01138 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NGFP01138 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NGFP01138 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.61■□□□□ 0.89
NGFP01138 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NGFP01138 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NGFP01138 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NGFP01138 AC004987.1-201ENST00000428627 508 ntBASIC20.6■□□□□ 0.89
NGFP01138 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.6■□□□□ 0.89
NGFP01138 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.6■□□□□ 0.89
NGFP01138 AC020928.2-201ENST00000588717 2197 ntBASIC20.6■□□□□ 0.89
NGFP01138 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NGFP01138 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
NGFP01138 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.59■□□□□ 0.89
NGFP01138 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
NGFP01138 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NGFP01138 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NGFP01138 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.59■□□□□ 0.89
NGFP01138 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NGFP01138 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NGFP01138 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NGFP01138 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NGFP01138 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.58■□□□□ 0.89
NGFP01138 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.58■□□□□ 0.89
NGFP01138 ATP5G2P3-201ENST00000429083 425 ntBASIC20.58■□□□□ 0.89
NGFP01138 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.58■□□□□ 0.89
NGFP01138 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NGFP01138 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NGFP01138 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.57■□□□□ 0.88
NGFP01138 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NGFP01138 KRT18P10-201ENST00000388836 1287 ntBASIC20.57■□□□□ 0.88
NGFP01138 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.57■□□□□ 0.88
NGFP01138 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
NGFP01138 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NGFP01138 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.57■□□□□ 0.88
NGFP01138 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
NGFP01138 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NGFP01138 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms