Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.54■■□□□ 1.52
PDGFBP01127 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
PDGFBP01127 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.53■■□□□ 1.52
PDGFBP01127 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PDGFBP01127 KRT18P10-201ENST00000388836 1287 ntBASIC24.53■■□□□ 1.52
PDGFBP01127 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.53■■□□□ 1.52
PDGFBP01127 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
PDGFBP01127 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.53■■□□□ 1.52
PDGFBP01127 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
PDGFBP01127 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDGFBP01127 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDGFBP01127 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDGFBP01127 AL031432.3-201ENST00000607698 485 ntBASIC24.51■■□□□ 1.51
PDGFBP01127 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.51■■□□□ 1.51
PDGFBP01127 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.51■■□□□ 1.51
PDGFBP01127 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDGFBP01127 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDGFBP01127 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.5■■□□□ 1.51
PDGFBP01127 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.5■■□□□ 1.51
PDGFBP01127 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.5■■□□□ 1.51
PDGFBP01127 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDGFBP01127 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PDGFBP01127 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDGFBP01127 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.49■■□□□ 1.51
PDGFBP01127 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDGFBP01127 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.49■■□□□ 1.51
PDGFBP01127 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PDGFBP01127 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDGFBP01127 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
PDGFBP01127 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.48■■□□□ 1.51
PDGFBP01127 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
PDGFBP01127 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PDGFBP01127 SUDS3P1-201ENST00000505831 966 ntBASIC24.48■■□□□ 1.51
PDGFBP01127 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.48■■□□□ 1.51
PDGFBP01127 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PDGFBP01127 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.47■■□□□ 1.51
PDGFBP01127 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
PDGFBP01127 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PDGFBP01127 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PDGFBP01127 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.47■■□□□ 1.51
PDGFBP01127 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.47■■□□□ 1.51
PDGFBP01127 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
PDGFBP01127 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.46■■□□□ 1.51
PDGFBP01127 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PDGFBP01127 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDGFBP01127 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDGFBP01127 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PDGFBP01127 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.44■■□□□ 1.5
PDGFBP01127 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
PDGFBP01127 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.44■■□□□ 1.5
PDGFBP01127 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.44■■□□□ 1.5
PDGFBP01127 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.44■■□□□ 1.5
PDGFBP01127 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.43■■□□□ 1.5
PDGFBP01127 UNC93B3-201ENST00000308076 687 ntBASIC24.43■■□□□ 1.5
PDGFBP01127 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PDGFBP01127 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.43■■□□□ 1.5
PDGFBP01127 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.43■■□□□ 1.5
PDGFBP01127 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDGFBP01127 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.42■■□□□ 1.5
PDGFBP01127 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDGFBP01127 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.42■■□□□ 1.5
PDGFBP01127 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.42■■□□□ 1.5
PDGFBP01127 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
PDGFBP01127 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDGFBP01127 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
PDGFBP01127 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
PDGFBP01127 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDGFBP01127 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.41■■□□□ 1.5
PDGFBP01127 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDGFBP01127 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.41■■□□□ 1.5
PDGFBP01127 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.41■■□□□ 1.5
PDGFBP01127 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.41■■□□□ 1.5
PDGFBP01127 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PDGFBP01127 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PDGFBP01127 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PDGFBP01127 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
PDGFBP01127 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
PDGFBP01127 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PDGFBP01127 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.4■■□□□ 1.5
PDGFBP01127 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDGFBP01127 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.4■■□□□ 1.5
PDGFBP01127 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.4■■□□□ 1.5
PDGFBP01127 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.4■■□□□ 1.5
PDGFBP01127 AL136162.1-201ENST00000607711 1078 ntBASIC24.4■■□□□ 1.5
PDGFBP01127 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDGFBP01127 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PDGFBP01127 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PDGFBP01127 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
PDGFBP01127 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PDGFBP01127 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDGFBP01127 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.38■■□□□ 1.49
PDGFBP01127 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDGFBP01127 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
PDGFBP01127 AC105265.2-201ENST00000467189 838 ntBASIC24.37■■□□□ 1.49
PDGFBP01127 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.37■■□□□ 1.49
PDGFBP01127 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.37■■□□□ 1.49
PDGFBP01127 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDGFBP01127 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDGFBP01127 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.36■■□□□ 1.49
PDGFBP01127 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms