Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
RTN3O95197 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.18■■□□□ 1.62
RTN3O95197 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.18■■□□□ 1.62
RTN3O95197 AC103834.1-201ENST00000520383 144 ntBASIC25.18■■□□□ 1.62
RTN3O95197 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.18■■□□□ 1.62
RTN3O95197 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
RTN3O95197 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RTN3O95197 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTN3O95197 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTN3O95197 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.17■■□□□ 1.62
RTN3O95197 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTN3O95197 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RTN3O95197 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
RTN3O95197 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.16■■□□□ 1.62
RTN3O95197 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
RTN3O95197 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RTN3O95197 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RTN3O95197 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RTN3O95197 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RTN3O95197 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RTN3O95197 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RTN3O95197 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
RTN3O95197 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RTN3O95197 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
RTN3O95197 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.13■■□□□ 1.61
RTN3O95197 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.13■■□□□ 1.61
RTN3O95197 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTN3O95197 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RTN3O95197 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.12■■□□□ 1.61
RTN3O95197 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.12■■□□□ 1.61
RTN3O95197 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTN3O95197 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.12■■□□□ 1.61
RTN3O95197 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.11■■□□□ 1.61
RTN3O95197 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RTN3O95197 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RTN3O95197 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.11■■□□□ 1.61
RTN3O95197 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.11■■□□□ 1.61
RTN3O95197 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.11■■□□□ 1.61
RTN3O95197 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RTN3O95197 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
RTN3O95197 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTN3O95197 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTN3O95197 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.09■■□□□ 1.61
RTN3O95197 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
RTN3O95197 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
RTN3O95197 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
RTN3O95197 AC022616.5-201ENST00000518796 181 ntBASIC25.09■■□□□ 1.61
RTN3O95197 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.09■■□□□ 1.61
RTN3O95197 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RTN3O95197 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RTN3O95197 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RTN3O95197 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.08■■□□□ 1.61
RTN3O95197 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTN3O95197 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.08■■□□□ 1.61
RTN3O95197 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.08■■□□□ 1.61
RTN3O95197 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTN3O95197 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTN3O95197 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTN3O95197 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
RTN3O95197 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
RTN3O95197 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
RTN3O95197 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.08■■□□□ 1.6
RTN3O95197 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
RTN3O95197 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.08■■□□□ 1.6
RTN3O95197 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.07■■□□□ 1.6
RTN3O95197 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTN3O95197 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTN3O95197 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
RTN3O95197 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.07■■□□□ 1.6
RTN3O95197 AL451085.2-201ENST00000605085 799 ntBASIC25.07■■□□□ 1.6
RTN3O95197 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTN3O95197 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTN3O95197 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.06■■□□□ 1.6
RTN3O95197 AC103724.3-201ENST00000564481 992 ntBASIC25.06■■□□□ 1.6
RTN3O95197 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RTN3O95197 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RTN3O95197 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTN3O95197 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTN3O95197 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTN3O95197 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTN3O95197 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTN3O95197 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RTN3O95197 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
RTN3O95197 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.05■■□□□ 1.6
RTN3O95197 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTN3O95197 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.05■■□□□ 1.6
RTN3O95197 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RTN3O95197 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.04■■□□□ 1.6
RTN3O95197 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
RTN3O95197 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RTN3O95197 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
RTN3O95197 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.04■■□□□ 1.6
RTN3O95197 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RTN3O95197 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
RTN3O95197 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RTN3O95197 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RTN3O95197 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.03■■□□□ 1.6
RTN3O95197 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RTN3O95197 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.03■■□□□ 1.6
RTN3O95197 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms