Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.73■■□□□ 1.71
CSPG5O95196 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.73■■□□□ 1.71
CSPG5O95196 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
CSPG5O95196 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.72■■□□□ 1.71
CSPG5O95196 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
CSPG5O95196 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.72■■□□□ 1.71
CSPG5O95196 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.72■■□□□ 1.71
CSPG5O95196 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.72■■□□□ 1.71
CSPG5O95196 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.72■■□□□ 1.71
CSPG5O95196 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.72■■□□□ 1.71
CSPG5O95196 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CSPG5O95196 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.71■■□□□ 1.71
CSPG5O95196 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.71■■□□□ 1.71
CSPG5O95196 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.71■■□□□ 1.71
CSPG5O95196 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CSPG5O95196 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CSPG5O95196 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.7■■□□□ 1.71
CSPG5O95196 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.7■■□□□ 1.71
CSPG5O95196 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CSPG5O95196 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CSPG5O95196 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CSPG5O95196 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CSPG5O95196 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.69■■□□□ 1.7
CSPG5O95196 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
CSPG5O95196 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.69■■□□□ 1.7
CSPG5O95196 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSPG5O95196 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
CSPG5O95196 KRT18P24-201ENST00000344739 1156 ntBASIC25.68■■□□□ 1.7
CSPG5O95196 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CSPG5O95196 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CSPG5O95196 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.68■■□□□ 1.7
CSPG5O95196 AC022616.5-201ENST00000518796 181 ntBASIC25.68■■□□□ 1.7
CSPG5O95196 AC131281.2-201ENST00000520478 145 ntBASIC25.68■■□□□ 1.7
CSPG5O95196 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.68■■□□□ 1.7
CSPG5O95196 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CSPG5O95196 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSPG5O95196 DRD5P2-201ENST00000421395 2012 ntBASIC25.67■■□□□ 1.7
CSPG5O95196 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
CSPG5O95196 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CSPG5O95196 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CSPG5O95196 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CSPG5O95196 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.66■■□□□ 1.7
CSPG5O95196 AL136116.3-201ENST00000402907 1138 ntBASIC25.66■■□□□ 1.7
CSPG5O95196 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.66■■□□□ 1.7
CSPG5O95196 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.66■■□□□ 1.7
CSPG5O95196 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
CSPG5O95196 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CSPG5O95196 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.66■■□□□ 1.7
CSPG5O95196 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
CSPG5O95196 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CSPG5O95196 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CSPG5O95196 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.64■■□□□ 1.7
CSPG5O95196 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CSPG5O95196 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.64■■□□□ 1.69
CSPG5O95196 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
CSPG5O95196 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
CSPG5O95196 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CSPG5O95196 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CSPG5O95196 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.63■■□□□ 1.69
CSPG5O95196 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
CSPG5O95196 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
CSPG5O95196 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.63■■□□□ 1.69
CSPG5O95196 AL139246.5-201ENST00000606645 996 ntBASIC25.63■■□□□ 1.69
CSPG5O95196 AC137630.3-201ENST00000607245 391 ntBASIC25.63■■□□□ 1.69
CSPG5O95196 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.63■■□□□ 1.69
CSPG5O95196 AC021242.3-201ENST00000607598 1377 ntBASIC25.63■■□□□ 1.69
CSPG5O95196 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CSPG5O95196 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CSPG5O95196 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CSPG5O95196 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.62■■□□□ 1.69
CSPG5O95196 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CSPG5O95196 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CSPG5O95196 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CSPG5O95196 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CSPG5O95196 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.61■■□□□ 1.69
CSPG5O95196 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.61■■□□□ 1.69
CSPG5O95196 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
CSPG5O95196 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
CSPG5O95196 BX255925.1-201ENST00000566954 1854 ntBASIC25.6■■□□□ 1.69
CSPG5O95196 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CSPG5O95196 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CSPG5O95196 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CSPG5O95196 AC092028.1-203ENST00000608262 953 ntBASIC25.6■■□□□ 1.69
CSPG5O95196 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
CSPG5O95196 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CSPG5O95196 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CSPG5O95196 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.59■■□□□ 1.69
CSPG5O95196 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CSPG5O95196 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CSPG5O95196 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
CSPG5O95196 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.59■■□□□ 1.69
CSPG5O95196 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
CSPG5O95196 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CSPG5O95196 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.58■■□□□ 1.69
CSPG5O95196 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CSPG5O95196 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.58■■□□□ 1.69
CSPG5O95196 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CSPG5O95196 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
CSPG5O95196 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.57■■□□□ 1.68
CSPG5O95196 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms