Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RPP40O75818 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RPP40O75818 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.62■■□□□ 1.53
RPP40O75818 AC019171.1-201ENST00000601251 1056 ntBASIC24.62■■□□□ 1.53
RPP40O75818 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.62■■□□□ 1.53
RPP40O75818 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.62■■□□□ 1.53
RPP40O75818 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RPP40O75818 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.62■■□□□ 1.53
RPP40O75818 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RPP40O75818 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.61■■□□□ 1.53
RPP40O75818 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.61■■□□□ 1.53
RPP40O75818 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
RPP40O75818 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.6■■□□□ 1.53
RPP40O75818 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.6■■□□□ 1.53
RPP40O75818 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.6■■□□□ 1.53
RPP40O75818 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.6■■□□□ 1.53
RPP40O75818 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
RPP40O75818 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
RPP40O75818 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.6■■□□□ 1.53
RPP40O75818 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RPP40O75818 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RPP40O75818 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.59■■□□□ 1.53
RPP40O75818 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
RPP40O75818 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
RPP40O75818 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
RPP40O75818 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.58■■□□□ 1.53
RPP40O75818 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.58■■□□□ 1.53
RPP40O75818 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.58■■□□□ 1.53
RPP40O75818 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
RPP40O75818 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.57■■□□□ 1.52
RPP40O75818 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
RPP40O75818 AC008406.3-201ENST00000620001 1374 ntBASIC24.57■■□□□ 1.52
RPP40O75818 Z92544.1-202ENST00000571933 1220 ntBASIC24.57■■□□□ 1.52
RPP40O75818 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
RPP40O75818 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RPP40O75818 MIR935-201ENST00000401179 91 ntBASIC24.56■■□□□ 1.52
RPP40O75818 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RPP40O75818 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.56■■□□□ 1.52
RPP40O75818 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RPP40O75818 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RPP40O75818 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RPP40O75818 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RPP40O75818 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
RPP40O75818 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.55■■□□□ 1.52
RPP40O75818 AC087393.1-201ENST00000582896 145 ntBASIC24.55■■□□□ 1.52
RPP40O75818 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.55■■□□□ 1.52
RPP40O75818 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPP40O75818 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPP40O75818 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.54■■□□□ 1.52
RPP40O75818 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPP40O75818 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPP40O75818 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPP40O75818 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RPP40O75818 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.53■■□□□ 1.52
RPP40O75818 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.53■■□□□ 1.52
RPP40O75818 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RPP40O75818 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPP40O75818 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.52■■□□□ 1.52
RPP40O75818 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.52■■□□□ 1.52
RPP40O75818 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.52■■□□□ 1.52
RPP40O75818 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
RPP40O75818 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPP40O75818 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
RPP40O75818 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RPP40O75818 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RPP40O75818 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPP40O75818 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.51■■□□□ 1.51
RPP40O75818 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.51■■□□□ 1.51
RPP40O75818 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPP40O75818 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.51■■□□□ 1.51
RPP40O75818 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.51■■□□□ 1.51
RPP40O75818 AC091060.1-201ENST00000623524 1766 ntBASIC24.51■■□□□ 1.51
RPP40O75818 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RPP40O75818 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RPP40O75818 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.5■■□□□ 1.51
RPP40O75818 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RPP40O75818 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RPP40O75818 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.5■■□□□ 1.51
RPP40O75818 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RPP40O75818 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RPP40O75818 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RPP40O75818 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
RPP40O75818 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RPP40O75818 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.48■■□□□ 1.51
RPP40O75818 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RPP40O75818 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RPP40O75818 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
RPP40O75818 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
RPP40O75818 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
RPP40O75818 RPS2P7-201ENST00000447334 885 ntBASIC24.47■■□□□ 1.51
RPP40O75818 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.47■■□□□ 1.51
RPP40O75818 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
RPP40O75818 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
RPP40O75818 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RPP40O75818 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RPP40O75818 LONRF2P2-201ENST00000439212 571 ntBASIC24.46■■□□□ 1.51
RPP40O75818 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.46■■□□□ 1.51
RPP40O75818 KRT125P-201ENST00000546827 989 ntBASIC24.46■■□□□ 1.51
RPP40O75818 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
RPP40O75818 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms