Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTP4A3O75365 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTP4A3O75365 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTP4A3O75365 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTP4A3O75365 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.56■■□□□ 1.04
PTP4A3O75365 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTP4A3O75365 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTP4A3O75365 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.55■■□□□ 1.04
PTP4A3O75365 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTP4A3O75365 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTP4A3O75365 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.54■■□□□ 1.04
PTP4A3O75365 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTP4A3O75365 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.54■■□□□ 1.04
PTP4A3O75365 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTP4A3O75365 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.53■■□□□ 1.04
PTP4A3O75365 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTP4A3O75365 SMPD5-203ENST00000639008 1464 ntBASIC21.53■■□□□ 1.04
PTP4A3O75365 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTP4A3O75365 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTP4A3O75365 MIR639-201ENST00000384974 98 ntBASIC21.53■■□□□ 1.04
PTP4A3O75365 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
PTP4A3O75365 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTP4A3O75365 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
PTP4A3O75365 MIR3960-201ENST00000583311 91 ntBASIC21.52■■□□□ 1.04
PTP4A3O75365 AC092296.2-201ENST00000589470 999 ntBASIC21.52■■□□□ 1.04
PTP4A3O75365 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTP4A3O75365 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTP4A3O75365 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
PTP4A3O75365 AP003733.4-201ENST00000623785 1697 ntBASIC21.51■■□□□ 1.03
PTP4A3O75365 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTP4A3O75365 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.51■■□□□ 1.03
PTP4A3O75365 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.51■■□□□ 1.03
PTP4A3O75365 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTP4A3O75365 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.51■■□□□ 1.03
PTP4A3O75365 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.51■■□□□ 1.03
PTP4A3O75365 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTP4A3O75365 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.51■■□□□ 1.03
PTP4A3O75365 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PTP4A3O75365 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTP4A3O75365 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTP4A3O75365 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PTP4A3O75365 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.5■■□□□ 1.03
PTP4A3O75365 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTP4A3O75365 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTP4A3O75365 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PTP4A3O75365 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PTP4A3O75365 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTP4A3O75365 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PTP4A3O75365 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PTP4A3O75365 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTP4A3O75365 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.48■■□□□ 1.03
PTP4A3O75365 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.48■■□□□ 1.03
PTP4A3O75365 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTP4A3O75365 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTP4A3O75365 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.48■■□□□ 1.03
PTP4A3O75365 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PTP4A3O75365 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTP4A3O75365 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.47■■□□□ 1.03
PTP4A3O75365 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTP4A3O75365 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
PTP4A3O75365 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.46■■□□□ 1.03
PTP4A3O75365 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.46■■□□□ 1.03
PTP4A3O75365 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTP4A3O75365 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTP4A3O75365 ECEL1P2-201ENST00000461596 1295 ntBASIC21.46■■□□□ 1.03
PTP4A3O75365 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.46■■□□□ 1.03
PTP4A3O75365 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.46■■□□□ 1.03
PTP4A3O75365 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.46■■□□□ 1.03
PTP4A3O75365 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PTP4A3O75365 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.46■■□□□ 1.03
PTP4A3O75365 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTP4A3O75365 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTP4A3O75365 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTP4A3O75365 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PTP4A3O75365 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
PTP4A3O75365 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PTP4A3O75365 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PTP4A3O75365 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.45■■□□□ 1.02
PTP4A3O75365 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTP4A3O75365 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTP4A3O75365 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.44■■□□□ 1.02
PTP4A3O75365 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTP4A3O75365 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTP4A3O75365 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PTP4A3O75365 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PTP4A3O75365 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PTP4A3O75365 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PTP4A3O75365 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.43■■□□□ 1.02
PTP4A3O75365 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTP4A3O75365 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTP4A3O75365 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTP4A3O75365 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PTP4A3O75365 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PTP4A3O75365 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTP4A3O75365 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTP4A3O75365 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.42■■□□□ 1.02
PTP4A3O75365 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
PTP4A3O75365 AC022413.1-201ENST00000624602 984 ntBASIC21.42■■□□□ 1.02
PTP4A3O75365 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.42■■□□□ 1.02
PTP4A3O75365 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms