Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.4■□□□□ 0.54
ZNF253O75346 AC079834.2-201ENST00000609776 1949 ntBASIC18.4■□□□□ 0.54
ZNF253O75346 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF253O75346 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF253O75346 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ZNF253O75346 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.4■□□□□ 0.54
ZNF253O75346 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF253O75346 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZNF253O75346 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
ZNF253O75346 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF253O75346 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.39■□□□□ 0.53
ZNF253O75346 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.39■□□□□ 0.53
ZNF253O75346 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.39■□□□□ 0.53
ZNF253O75346 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF253O75346 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
ZNF253O75346 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF253O75346 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF253O75346 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF253O75346 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF253O75346 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.38■□□□□ 0.53
ZNF253O75346 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
ZNF253O75346 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF253O75346 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF253O75346 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.38■□□□□ 0.53
ZNF253O75346 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ZNF253O75346 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF253O75346 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF253O75346 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF253O75346 CLDN5-201ENST00000403084 2357 ntBASIC18.37■□□□□ 0.53
ZNF253O75346 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF253O75346 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF253O75346 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF253O75346 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF253O75346 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF253O75346 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ZNF253O75346 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.37■□□□□ 0.53
ZNF253O75346 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF253O75346 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF253O75346 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
ZNF253O75346 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF253O75346 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ZNF253O75346 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF253O75346 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF253O75346 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF253O75346 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF253O75346 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF253O75346 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF253O75346 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZNF253O75346 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF253O75346 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF253O75346 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF253O75346 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF253O75346 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF253O75346 DUX4L11-201ENST00000611504 1267 ntBASIC18.34■□□□□ 0.53
ZNF253O75346 DUX4L12-201ENST00000614593 1267 ntBASIC18.34■□□□□ 0.53
ZNF253O75346 DUX4L14-201ENST00000621227 1267 ntBASIC18.34■□□□□ 0.53
ZNF253O75346 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF253O75346 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF253O75346 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF253O75346 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF253O75346 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.33■□□□□ 0.53
ZNF253O75346 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
ZNF253O75346 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF253O75346 AL359258.2-201ENST00000564063 1566 ntBASIC18.33■□□□□ 0.52
ZNF253O75346 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF253O75346 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF253O75346 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF253O75346 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ZNF253O75346 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF253O75346 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF253O75346 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF253O75346 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF253O75346 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF253O75346 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF253O75346 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF253O75346 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.32■□□□□ 0.52
ZNF253O75346 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF253O75346 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF253O75346 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ZNF253O75346 AC096887.2-201ENST00000623443 1957 ntBASIC18.31■□□□□ 0.52
ZNF253O75346 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF253O75346 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF253O75346 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF253O75346 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF253O75346 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF253O75346 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF253O75346 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF253O75346 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF253O75346 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF253O75346 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF253O75346 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF253O75346 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF253O75346 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ZNF253O75346 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF253O75346 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.3■□□□□ 0.52
ZNF253O75346 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF253O75346 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF253O75346 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF253O75346 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF253O75346 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms