Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.12■□□□□ 0.81
PDCD6O75340 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.12■□□□□ 0.81
PDCD6O75340 AP003733.4-201ENST00000623785 1697 ntBASIC20.12■□□□□ 0.81
PDCD6O75340 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PDCD6O75340 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PDCD6O75340 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDCD6O75340 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDCD6O75340 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
PDCD6O75340 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.11■□□□□ 0.81
PDCD6O75340 AL157400.5-201ENST00000507624 621 ntBASIC20.11■□□□□ 0.81
PDCD6O75340 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.11■□□□□ 0.81
PDCD6O75340 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDCD6O75340 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.11■□□□□ 0.81
PDCD6O75340 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDCD6O75340 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDCD6O75340 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.1■□□□□ 0.81
PDCD6O75340 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PDCD6O75340 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDCD6O75340 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDCD6O75340 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDCD6O75340 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.1■□□□□ 0.81
PDCD6O75340 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD6O75340 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD6O75340 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.09■□□□□ 0.81
PDCD6O75340 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD6O75340 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD6O75340 SLC6A10P-202ENST00000431994 2058 ntBASIC20.09■□□□□ 0.81
PDCD6O75340 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDCD6O75340 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDCD6O75340 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDCD6O75340 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDCD6O75340 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PDCD6O75340 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.08■□□□□ 0.81
PDCD6O75340 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDCD6O75340 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDCD6O75340 AC025884.2-201ENST00000553429 711 ntBASIC20.08■□□□□ 0.81
PDCD6O75340 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
PDCD6O75340 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDCD6O75340 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDCD6O75340 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.07■□□□□ 0.8
PDCD6O75340 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD6O75340 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD6O75340 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.07■□□□□ 0.8
PDCD6O75340 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD6O75340 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD6O75340 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD6O75340 MIR3960-201ENST00000583311 91 ntBASIC20.07■□□□□ 0.8
PDCD6O75340 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD6O75340 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD6O75340 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD6O75340 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD6O75340 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD6O75340 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDCD6O75340 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDCD6O75340 AC060814.1-201ENST00000554326 538 ntBASIC20.06■□□□□ 0.8
PDCD6O75340 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PDCD6O75340 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDCD6O75340 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDCD6O75340 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDCD6O75340 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.05■□□□□ 0.8
PDCD6O75340 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.05■□□□□ 0.8
PDCD6O75340 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.05■□□□□ 0.8
PDCD6O75340 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.05■□□□□ 0.8
PDCD6O75340 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDCD6O75340 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.05■□□□□ 0.8
PDCD6O75340 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PDCD6O75340 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD6O75340 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD6O75340 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD6O75340 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD6O75340 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD6O75340 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD6O75340 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD6O75340 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD6O75340 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD6O75340 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD6O75340 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD6O75340 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD6O75340 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD6O75340 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.04■□□□□ 0.8
PDCD6O75340 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD6O75340 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD6O75340 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD6O75340 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD6O75340 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD6O75340 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD6O75340 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD6O75340 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PDCD6O75340 LINC01124-201ENST00000409786 2117 ntBASIC20.02■□□□□ 0.8
PDCD6O75340 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDCD6O75340 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDCD6O75340 SMPD5-203ENST00000639008 1464 ntBASIC20.02■□□□□ 0.8
PDCD6O75340 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDCD6O75340 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDCD6O75340 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.02■□□□□ 0.79
PDCD6O75340 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDCD6O75340 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDCD6O75340 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PDCD6O75340 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDCD6O75340 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms