Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.45■■□□□ 1.66
TBC1D4O60343 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TBC1D4O60343 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TBC1D4O60343 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
TBC1D4O60343 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TBC1D4O60343 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
TBC1D4O60343 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TBC1D4O60343 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TBC1D4O60343 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
TBC1D4O60343 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
TBC1D4O60343 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TBC1D4O60343 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TBC1D4O60343 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
TBC1D4O60343 KRT18P24-201ENST00000344739 1156 ntBASIC25.42■■□□□ 1.66
TBC1D4O60343 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.42■■□□□ 1.66
TBC1D4O60343 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.42■■□□□ 1.66
TBC1D4O60343 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TBC1D4O60343 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TBC1D4O60343 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.41■■□□□ 1.66
TBC1D4O60343 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.41■■□□□ 1.66
TBC1D4O60343 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.41■■□□□ 1.66
TBC1D4O60343 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.41■■□□□ 1.66
TBC1D4O60343 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.41■■□□□ 1.66
TBC1D4O60343 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TBC1D4O60343 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
TBC1D4O60343 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TBC1D4O60343 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TBC1D4O60343 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
TBC1D4O60343 Z92544.1-202ENST00000571933 1220 ntBASIC25.4■■□□□ 1.66
TBC1D4O60343 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.4■■□□□ 1.66
TBC1D4O60343 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
TBC1D4O60343 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.39■■□□□ 1.66
TBC1D4O60343 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TBC1D4O60343 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TBC1D4O60343 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
TBC1D4O60343 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.38■■□□□ 1.65
TBC1D4O60343 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
TBC1D4O60343 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.38■■□□□ 1.65
TBC1D4O60343 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.38■■□□□ 1.65
TBC1D4O60343 AC239859.2-201ENST00000444165 318 ntBASIC25.38■■□□□ 1.65
TBC1D4O60343 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.38■■□□□ 1.65
TBC1D4O60343 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.38■■□□□ 1.65
TBC1D4O60343 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.38■■□□□ 1.65
TBC1D4O60343 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TBC1D4O60343 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
TBC1D4O60343 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TBC1D4O60343 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
TBC1D4O60343 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.36■■□□□ 1.65
TBC1D4O60343 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
TBC1D4O60343 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
TBC1D4O60343 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TBC1D4O60343 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
TBC1D4O60343 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TBC1D4O60343 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
TBC1D4O60343 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TBC1D4O60343 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.35■■□□□ 1.65
TBC1D4O60343 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.35■■□□□ 1.65
TBC1D4O60343 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.35■■□□□ 1.65
TBC1D4O60343 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
TBC1D4O60343 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.35■■□□□ 1.65
TBC1D4O60343 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.35■■□□□ 1.65
TBC1D4O60343 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TBC1D4O60343 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
TBC1D4O60343 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TBC1D4O60343 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.34■■□□□ 1.65
TBC1D4O60343 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.65
TBC1D4O60343 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TBC1D4O60343 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TBC1D4O60343 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.33■■□□□ 1.65
TBC1D4O60343 AC120024.1-201ENST00000562672 995 ntBASIC25.33■■□□□ 1.65
TBC1D4O60343 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TBC1D4O60343 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TBC1D4O60343 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TBC1D4O60343 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TBC1D4O60343 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.32■■□□□ 1.64
TBC1D4O60343 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
TBC1D4O60343 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TBC1D4O60343 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TBC1D4O60343 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TBC1D4O60343 AC131212.1-201ENST00000613771 668 ntBASIC25.31■■□□□ 1.64
TBC1D4O60343 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.31■■□□□ 1.64
TBC1D4O60343 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
TBC1D4O60343 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
TBC1D4O60343 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
TBC1D4O60343 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
TBC1D4O60343 THA1P-201ENST00000590384 1145 ntBASIC25.3■■□□□ 1.64
TBC1D4O60343 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.3■■□□□ 1.64
TBC1D4O60343 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.3■■□□□ 1.64
TBC1D4O60343 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
TBC1D4O60343 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TBC1D4O60343 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.29■■□□□ 1.64
TBC1D4O60343 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TBC1D4O60343 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TBC1D4O60343 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.29■■□□□ 1.64
TBC1D4O60343 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.29■■□□□ 1.64
TBC1D4O60343 AC137630.3-201ENST00000607245 391 ntBASIC25.29■■□□□ 1.64
TBC1D4O60343 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.29■■□□□ 1.64
TBC1D4O60343 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TBC1D4O60343 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
TBC1D4O60343 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms