Protein–RNA interactions for Protein: O15018

PDZD2, PDZ domain-containing protein 2, humanhuman

Predictions only

Length 2,839 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2O15018 AC105265.2-201ENST00000467189 838 ntBASIC20.46■□□□□ 0.87
PDZD2O15018 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDZD2O15018 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDZD2O15018 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PDZD2O15018 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.46■□□□□ 0.87
PDZD2O15018 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.46■□□□□ 0.87
PDZD2O15018 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDZD2O15018 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDZD2O15018 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.45■□□□□ 0.86
PDZD2O15018 UNC93B3-201ENST00000308076 687 ntBASIC20.45■□□□□ 0.86
PDZD2O15018 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PDZD2O15018 ABCB10P3-201ENST00000561950 2166 ntBASIC20.44■□□□□ 0.86
PDZD2O15018 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDZD2O15018 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PDZD2O15018 MTDHP2-201ENST00000601468 714 ntBASIC20.44■□□□□ 0.86
PDZD2O15018 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.44■□□□□ 0.86
PDZD2O15018 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDZD2O15018 AL355001.2-201ENST00000620617 1191 ntBASIC20.44■□□□□ 0.86
PDZD2O15018 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDZD2O15018 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDZD2O15018 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDZD2O15018 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDZD2O15018 AL136967.2-201ENST00000623968 743 ntBASIC20.43■□□□□ 0.86
PDZD2O15018 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDZD2O15018 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
PDZD2O15018 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.42■□□□□ 0.86
PDZD2O15018 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDZD2O15018 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PDZD2O15018 EDA-201ENST00000338901 1233 ntBASIC20.41■□□□□ 0.86
PDZD2O15018 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDZD2O15018 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDZD2O15018 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.41■□□□□ 0.86
PDZD2O15018 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDZD2O15018 RARRES2P11-201ENST00000635158 484 ntBASIC20.41■□□□□ 0.86
PDZD2O15018 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.41■□□□□ 0.86
PDZD2O15018 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDZD2O15018 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.41■□□□□ 0.86
PDZD2O15018 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
PDZD2O15018 AC024257.2-201ENST00000549699 147 ntBASIC20.4■□□□□ 0.86
PDZD2O15018 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDZD2O15018 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDZD2O15018 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PDZD2O15018 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PDZD2O15018 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PDZD2O15018 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDZD2O15018 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.4■□□□□ 0.86
PDZD2O15018 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDZD2O15018 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.4■□□□□ 0.86
PDZD2O15018 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.4■□□□□ 0.86
PDZD2O15018 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDZD2O15018 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PDZD2O15018 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDZD2O15018 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.39■□□□□ 0.85
PDZD2O15018 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDZD2O15018 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDZD2O15018 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDZD2O15018 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.38■□□□□ 0.85
PDZD2O15018 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PDZD2O15018 AP002414.2-202ENST00000590929 1450 ntBASIC20.38■□□□□ 0.85
PDZD2O15018 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDZD2O15018 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PDZD2O15018 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.38■□□□□ 0.85
PDZD2O15018 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDZD2O15018 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDZD2O15018 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
PDZD2O15018 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDZD2O15018 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.37■□□□□ 0.85
PDZD2O15018 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDZD2O15018 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PDZD2O15018 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.37■□□□□ 0.85
PDZD2O15018 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDZD2O15018 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PDZD2O15018 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.36■□□□□ 0.85
PDZD2O15018 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.36■□□□□ 0.85
PDZD2O15018 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDZD2O15018 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDZD2O15018 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDZD2O15018 AL136162.1-201ENST00000607711 1078 ntBASIC20.36■□□□□ 0.85
PDZD2O15018 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.36■□□□□ 0.85
PDZD2O15018 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDZD2O15018 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDZD2O15018 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.35■□□□□ 0.85
PDZD2O15018 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDZD2O15018 MIR939-201ENST00000401314 82 ntBASIC20.35■□□□□ 0.85
PDZD2O15018 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.35■□□□□ 0.85
PDZD2O15018 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDZD2O15018 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.35■□□□□ 0.85
PDZD2O15018 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDZD2O15018 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDZD2O15018 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDZD2O15018 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.34■□□□□ 0.85
PDZD2O15018 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDZD2O15018 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDZD2O15018 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDZD2O15018 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.34■□□□□ 0.85
PDZD2O15018 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.34■□□□□ 0.85
PDZD2O15018 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDZD2O15018 KRT18P10-201ENST00000388836 1287 ntBASIC20.33■□□□□ 0.85
PDZD2O15018 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.33■□□□□ 0.85
PDZD2O15018 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms