Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LRRC53A6NM62 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
LRRC53A6NM62 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.75■■□□□ 1.71
LRRC53A6NM62 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
LRRC53A6NM62 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
LRRC53A6NM62 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
LRRC53A6NM62 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
LRRC53A6NM62 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.75■■□□□ 1.71
LRRC53A6NM62 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.75■■□□□ 1.71
LRRC53A6NM62 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
LRRC53A6NM62 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
LRRC53A6NM62 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
LRRC53A6NM62 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
LRRC53A6NM62 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
LRRC53A6NM62 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LRRC53A6NM62 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.74■■□□□ 1.71
LRRC53A6NM62 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
LRRC53A6NM62 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.74■■□□□ 1.71
LRRC53A6NM62 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
LRRC53A6NM62 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.73■■□□□ 1.71
LRRC53A6NM62 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
LRRC53A6NM62 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
LRRC53A6NM62 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
LRRC53A6NM62 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.73■■□□□ 1.71
LRRC53A6NM62 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
LRRC53A6NM62 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
LRRC53A6NM62 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
LRRC53A6NM62 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
LRRC53A6NM62 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
LRRC53A6NM62 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.72■■□□□ 1.71
LRRC53A6NM62 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
LRRC53A6NM62 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.72■■□□□ 1.71
LRRC53A6NM62 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LRRC53A6NM62 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LRRC53A6NM62 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
LRRC53A6NM62 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
LRRC53A6NM62 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
LRRC53A6NM62 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LRRC53A6NM62 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
LRRC53A6NM62 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LRRC53A6NM62 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LRRC53A6NM62 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.7■■□□□ 1.71
LRRC53A6NM62 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
LRRC53A6NM62 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.7
LRRC53A6NM62 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.7■■□□□ 1.7
LRRC53A6NM62 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
LRRC53A6NM62 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
LRRC53A6NM62 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LRRC53A6NM62 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.69■■□□□ 1.7
LRRC53A6NM62 MIR3960-201ENST00000583311 91 ntBASIC25.69■■□□□ 1.7
LRRC53A6NM62 AC092296.2-201ENST00000589470 999 ntBASIC25.69■■□□□ 1.7
LRRC53A6NM62 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LRRC53A6NM62 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LRRC53A6NM62 SMPD5-203ENST00000639008 1464 ntBASIC25.68■■□□□ 1.7
LRRC53A6NM62 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LRRC53A6NM62 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
LRRC53A6NM62 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
LRRC53A6NM62 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.67■■□□□ 1.7
LRRC53A6NM62 MIR639-201ENST00000384974 98 ntBASIC25.67■■□□□ 1.7
LRRC53A6NM62 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
LRRC53A6NM62 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.67■■□□□ 1.7
LRRC53A6NM62 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.67■■□□□ 1.7
LRRC53A6NM62 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
LRRC53A6NM62 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.67■■□□□ 1.7
LRRC53A6NM62 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
LRRC53A6NM62 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LRRC53A6NM62 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.66■■□□□ 1.7
LRRC53A6NM62 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LRRC53A6NM62 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
LRRC53A6NM62 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.66■■□□□ 1.7
LRRC53A6NM62 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.66■■□□□ 1.7
LRRC53A6NM62 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
LRRC53A6NM62 AP003733.4-201ENST00000623785 1697 ntBASIC25.65■■□□□ 1.7
LRRC53A6NM62 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LRRC53A6NM62 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
LRRC53A6NM62 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LRRC53A6NM62 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
LRRC53A6NM62 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
LRRC53A6NM62 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
LRRC53A6NM62 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.64■■□□□ 1.7
LRRC53A6NM62 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
LRRC53A6NM62 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
LRRC53A6NM62 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LRRC53A6NM62 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LRRC53A6NM62 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LRRC53A6NM62 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LRRC53A6NM62 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.63■■□□□ 1.69
LRRC53A6NM62 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LRRC53A6NM62 LINC01124-201ENST00000409786 2117 ntBASIC25.63■■□□□ 1.69
LRRC53A6NM62 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
LRRC53A6NM62 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LRRC53A6NM62 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.62■■□□□ 1.69
LRRC53A6NM62 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.62■■□□□ 1.69
LRRC53A6NM62 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
LRRC53A6NM62 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LRRC53A6NM62 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
LRRC53A6NM62 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.61■■□□□ 1.69
LRRC53A6NM62 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
LRRC53A6NM62 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
LRRC53A6NM62 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms