Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM235A6NFC5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM235A6NFC5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM235A6NFC5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM235A6NFC5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM235A6NFC5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM235A6NFC5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM235A6NFC5 AL359258.2-201ENST00000564063 1566 ntBASIC20.28■□□□□ 0.84
TMEM235A6NFC5 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM235A6NFC5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM235A6NFC5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TMEM235A6NFC5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM235A6NFC5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.27■□□□□ 0.84
TMEM235A6NFC5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM235A6NFC5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.27■□□□□ 0.83
TMEM235A6NFC5 SLC6A10P-202ENST00000431994 2058 ntBASIC20.26■□□□□ 0.83
TMEM235A6NFC5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM235A6NFC5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM235A6NFC5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEM235A6NFC5 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM235A6NFC5 AC008813.1-201ENST00000536597 885 ntBASIC20.26■□□□□ 0.83
TMEM235A6NFC5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEM235A6NFC5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEM235A6NFC5 AC097639.1-201ENST00000565519 1891 ntBASIC20.26■□□□□ 0.83
TMEM235A6NFC5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM235A6NFC5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TMEM235A6NFC5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM235A6NFC5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM235A6NFC5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM235A6NFC5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM235A6NFC5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM235A6NFC5 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM235A6NFC5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TMEM235A6NFC5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM235A6NFC5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM235A6NFC5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.24■□□□□ 0.83
TMEM235A6NFC5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.24■□□□□ 0.83
TMEM235A6NFC5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM235A6NFC5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM235A6NFC5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.24■□□□□ 0.83
TMEM235A6NFC5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.24■□□□□ 0.83
TMEM235A6NFC5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.24■□□□□ 0.83
TMEM235A6NFC5 AC148477.6-201ENST00000623746 465 ntBASIC20.24■□□□□ 0.83
TMEM235A6NFC5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM235A6NFC5 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM235A6NFC5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TMEM235A6NFC5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM235A6NFC5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM235A6NFC5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM235A6NFC5 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM235A6NFC5 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM235A6NFC5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.23■□□□□ 0.83
TMEM235A6NFC5 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM235A6NFC5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM235A6NFC5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM235A6NFC5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM235A6NFC5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.22■□□□□ 0.83
TMEM235A6NFC5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM235A6NFC5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM235A6NFC5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TMEM235A6NFC5 LINC01971-201ENST00000617888 1048 ntBASIC20.22■□□□□ 0.83
TMEM235A6NFC5 LINC00543-201ENST00000567234 1845 ntBASIC20.22■□□□□ 0.83
TMEM235A6NFC5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TMEM235A6NFC5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.21■□□□□ 0.83
TMEM235A6NFC5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TMEM235A6NFC5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM235A6NFC5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM235A6NFC5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM235A6NFC5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM235A6NFC5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM235A6NFC5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM235A6NFC5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TMEM235A6NFC5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TMEM235A6NFC5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM235A6NFC5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM235A6NFC5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM235A6NFC5 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.2■□□□□ 0.82
TMEM235A6NFC5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.2■□□□□ 0.82
TMEM235A6NFC5 DUX4L13-201ENST00000554103 1267 ntBASIC20.2■□□□□ 0.82
TMEM235A6NFC5 DUX4L15-201ENST00000611059 1267 ntBASIC20.2■□□□□ 0.82
TMEM235A6NFC5 DUX4L23-201ENST00000615195 1269 ntBASIC20.2■□□□□ 0.82
TMEM235A6NFC5 DUX4L24-201ENST00000617576 1269 ntBASIC20.2■□□□□ 0.82
TMEM235A6NFC5 DUX4L22-201ENST00000618238 1269 ntBASIC20.2■□□□□ 0.82
TMEM235A6NFC5 DUX4L20-201ENST00000619712 1269 ntBASIC20.2■□□□□ 0.82
TMEM235A6NFC5 DUX4L21-201ENST00000622058 1269 ntBASIC20.2■□□□□ 0.82
TMEM235A6NFC5 DUX4L10-201ENST00000622460 1267 ntBASIC20.2■□□□□ 0.82
TMEM235A6NFC5 DUX4L25-201ENST00000624915 1269 ntBASIC20.2■□□□□ 0.82
TMEM235A6NFC5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TMEM235A6NFC5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM235A6NFC5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM235A6NFC5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM235A6NFC5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM235A6NFC5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM235A6NFC5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM235A6NFC5 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TMEM235A6NFC5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM235A6NFC5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM235A6NFC5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM235A6NFC5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM235A6NFC5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms