Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TBC1D3FA6NER0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.91■■□□□ 1.42
TBC1D3FA6NER0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
TBC1D3FA6NER0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
TBC1D3FA6NER0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.9■■□□□ 1.42
TBC1D3FA6NER0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.9■■□□□ 1.42
TBC1D3FA6NER0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.9■■□□□ 1.42
TBC1D3FA6NER0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.9■■□□□ 1.42
TBC1D3FA6NER0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TBC1D3FA6NER0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TBC1D3FA6NER0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
TBC1D3FA6NER0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TBC1D3FA6NER0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TBC1D3FA6NER0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.89■■□□□ 1.41
TBC1D3FA6NER0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.89■■□□□ 1.41
TBC1D3FA6NER0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
TBC1D3FA6NER0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TBC1D3FA6NER0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3FA6NER0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.88■■□□□ 1.41
TBC1D3FA6NER0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3FA6NER0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3FA6NER0 KRT18P24-201ENST00000344739 1156 ntBASIC23.88■■□□□ 1.41
TBC1D3FA6NER0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3FA6NER0 Z92544.1-202ENST00000571933 1220 ntBASIC23.88■■□□□ 1.41
TBC1D3FA6NER0 THA1P-201ENST00000590384 1145 ntBASIC23.88■■□□□ 1.41
TBC1D3FA6NER0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3FA6NER0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3FA6NER0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3FA6NER0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3FA6NER0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
TBC1D3FA6NER0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D3FA6NER0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D3FA6NER0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.87■■□□□ 1.41
TBC1D3FA6NER0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D3FA6NER0 AC131212.1-201ENST00000613771 668 ntBASIC23.87■■□□□ 1.41
TBC1D3FA6NER0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.87■■□□□ 1.41
TBC1D3FA6NER0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D3FA6NER0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D3FA6NER0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D3FA6NER0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.86■■□□□ 1.41
TBC1D3FA6NER0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.86■■□□□ 1.41
TBC1D3FA6NER0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TBC1D3FA6NER0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.86■■□□□ 1.41
TBC1D3FA6NER0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TBC1D3FA6NER0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.85■■□□□ 1.41
TBC1D3FA6NER0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.85■■□□□ 1.41
TBC1D3FA6NER0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
TBC1D3FA6NER0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
TBC1D3FA6NER0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TBC1D3FA6NER0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.84■■□□□ 1.41
TBC1D3FA6NER0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TBC1D3FA6NER0 BX664725.1-201ENST00000438252 379 ntBASIC23.84■■□□□ 1.41
TBC1D3FA6NER0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.84■■□□□ 1.41
TBC1D3FA6NER0 KRT125P-201ENST00000546827 989 ntBASIC23.84■■□□□ 1.41
TBC1D3FA6NER0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.84■■□□□ 1.41
TBC1D3FA6NER0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.84■■□□□ 1.41
TBC1D3FA6NER0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TBC1D3FA6NER0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
TBC1D3FA6NER0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.83■■□□□ 1.41
TBC1D3FA6NER0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.83■■□□□ 1.41
TBC1D3FA6NER0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.4
TBC1D3FA6NER0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D3FA6NER0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D3FA6NER0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D3FA6NER0 AC120024.1-201ENST00000562672 995 ntBASIC23.82■■□□□ 1.4
TBC1D3FA6NER0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.82■■□□□ 1.4
TBC1D3FA6NER0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D3FA6NER0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D3FA6NER0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D3FA6NER0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D3FA6NER0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D3FA6NER0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D3FA6NER0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D3FA6NER0 AL592295.1-201ENST00000400984 884 ntBASIC23.81■■□□□ 1.4
TBC1D3FA6NER0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.8■■□□□ 1.4
TBC1D3FA6NER0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
TBC1D3FA6NER0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TBC1D3FA6NER0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
TBC1D3FA6NER0 AL356441.2-201ENST00000443009 864 ntBASIC23.8■■□□□ 1.4
TBC1D3FA6NER0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.8■■□□□ 1.4
TBC1D3FA6NER0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.8■■□□□ 1.4
TBC1D3FA6NER0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.79■■□□□ 1.4
TBC1D3FA6NER0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
TBC1D3FA6NER0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
TBC1D3FA6NER0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
TBC1D3FA6NER0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
TBC1D3FA6NER0 MIR4787-201ENST00000607364 84 ntBASIC23.79■■□□□ 1.4
TBC1D3FA6NER0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
TBC1D3FA6NER0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TBC1D3FA6NER0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TBC1D3FA6NER0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.78■■□□□ 1.4
TBC1D3FA6NER0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TBC1D3FA6NER0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TBC1D3FA6NER0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TBC1D3FA6NER0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TBC1D3FA6NER0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.77■■□□□ 1.4
TBC1D3FA6NER0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TBC1D3FA6NER0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.76■■□□□ 1.39
TBC1D3FA6NER0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TBC1D3FA6NER0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms