Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TCRBV9S1A1TA0A576 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TCRBV9S1A1TA0A576 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TCRBV9S1A1TA0A576 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.06■■□□□ 1.44
TCRBV9S1A1TA0A576 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TCRBV9S1A1TA0A576 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TCRBV9S1A1TA0A576 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TCRBV9S1A1TA0A576 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TCRBV9S1A1TA0A576 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
TCRBV9S1A1TA0A576 AP003733.4-201ENST00000623785 1697 ntBASIC24.05■■□□□ 1.44
TCRBV9S1A1TA0A576 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TCRBV9S1A1TA0A576 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.05■■□□□ 1.44
TCRBV9S1A1TA0A576 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TCRBV9S1A1TA0A576 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TCRBV9S1A1TA0A576 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.05■■□□□ 1.44
TCRBV9S1A1TA0A576 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TCRBV9S1A1TA0A576 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
TCRBV9S1A1TA0A576 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.04■■□□□ 1.44
TCRBV9S1A1TA0A576 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TCRBV9S1A1TA0A576 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TCRBV9S1A1TA0A576 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TCRBV9S1A1TA0A576 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
TCRBV9S1A1TA0A576 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TCRBV9S1A1TA0A576 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TCRBV9S1A1TA0A576 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TCRBV9S1A1TA0A576 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TCRBV9S1A1TA0A576 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
TCRBV9S1A1TA0A576 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TCRBV9S1A1TA0A576 LINC01124-201ENST00000409786 2117 ntBASIC24.03■■□□□ 1.44
TCRBV9S1A1TA0A576 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TCRBV9S1A1TA0A576 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TCRBV9S1A1TA0A576 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TCRBV9S1A1TA0A576 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
TCRBV9S1A1TA0A576 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.02■■□□□ 1.44
TCRBV9S1A1TA0A576 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TCRBV9S1A1TA0A576 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TCRBV9S1A1TA0A576 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.02■■□□□ 1.44
TCRBV9S1A1TA0A576 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.02■■□□□ 1.44
TCRBV9S1A1TA0A576 AC016575.1-201ENST00000607026 382 ntBASIC24.02■■□□□ 1.44
TCRBV9S1A1TA0A576 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TCRBV9S1A1TA0A576 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TCRBV9S1A1TA0A576 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.01■■□□□ 1.43
TCRBV9S1A1TA0A576 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
TCRBV9S1A1TA0A576 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TCRBV9S1A1TA0A576 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TCRBV9S1A1TA0A576 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
TCRBV9S1A1TA0A576 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TCRBV9S1A1TA0A576 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TCRBV9S1A1TA0A576 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TCRBV9S1A1TA0A576 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24■■□□□ 1.43
TCRBV9S1A1TA0A576 AL157400.5-201ENST00000507624 621 ntBASIC24■■□□□ 1.43
TCRBV9S1A1TA0A576 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
TCRBV9S1A1TA0A576 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TCRBV9S1A1TA0A576 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TCRBV9S1A1TA0A576 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24■■□□□ 1.43
TCRBV9S1A1TA0A576 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
TCRBV9S1A1TA0A576 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TCRBV9S1A1TA0A576 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.99■■□□□ 1.43
TCRBV9S1A1TA0A576 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.99■■□□□ 1.43
TCRBV9S1A1TA0A576 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.99■■□□□ 1.43
TCRBV9S1A1TA0A576 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TCRBV9S1A1TA0A576 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TCRBV9S1A1TA0A576 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TCRBV9S1A1TA0A576 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.99■■□□□ 1.43
TCRBV9S1A1TA0A576 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
TCRBV9S1A1TA0A576 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TCRBV9S1A1TA0A576 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TCRBV9S1A1TA0A576 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TCRBV9S1A1TA0A576 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TCRBV9S1A1TA0A576 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.98■■□□□ 1.43
TCRBV9S1A1TA0A576 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TCRBV9S1A1TA0A576 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TCRBV9S1A1TA0A576 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TCRBV9S1A1TA0A576 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.98■■□□□ 1.43
TCRBV9S1A1TA0A576 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TCRBV9S1A1TA0A576 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TCRBV9S1A1TA0A576 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TCRBV9S1A1TA0A576 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
TCRBV9S1A1TA0A576 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TCRBV9S1A1TA0A576 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TCRBV9S1A1TA0A576 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TCRBV9S1A1TA0A576 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TCRBV9S1A1TA0A576 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.96■■□□□ 1.43
TCRBV9S1A1TA0A576 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TCRBV9S1A1TA0A576 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TCRBV9S1A1TA0A576 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
TCRBV9S1A1TA0A576 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.96■■□□□ 1.43
TCRBV9S1A1TA0A576 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.96■■□□□ 1.43
TCRBV9S1A1TA0A576 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TCRBV9S1A1TA0A576 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
TCRBV9S1A1TA0A576 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.95■■□□□ 1.43
TCRBV9S1A1TA0A576 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
TCRBV9S1A1TA0A576 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TCRBV9S1A1TA0A576 AC025884.2-201ENST00000553429 711 ntBASIC23.95■■□□□ 1.42
TCRBV9S1A1TA0A576 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.95■■□□□ 1.42
TCRBV9S1A1TA0A576 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TCRBV9S1A1TA0A576 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.94■■□□□ 1.42
TCRBV9S1A1TA0A576 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.94■■□□□ 1.42
TCRBV9S1A1TA0A576 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TCRBV9S1A1TA0A576 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms