Protein–RNA interactions for Protein: A0A1B0GVG4

CCDC194, Coiled-coil domain-containing protein 194, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC194A0A1B0GVG4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC194A0A1B0GVG4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC194A0A1B0GVG4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
CCDC194A0A1B0GVG4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CCDC194A0A1B0GVG4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
CCDC194A0A1B0GVG4 KRT18P10-201ENST00000388836 1287 ntBASIC27.34■■□□□ 1.97
CCDC194A0A1B0GVG4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
CCDC194A0A1B0GVG4 MIR6765-201ENST00000614092 87 ntBASIC27.34■■□□□ 1.97
CCDC194A0A1B0GVG4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
CCDC194A0A1B0GVG4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
CCDC194A0A1B0GVG4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27.33■■□□□ 1.97
CCDC194A0A1B0GVG4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CCDC194A0A1B0GVG4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CCDC194A0A1B0GVG4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC27.33■■□□□ 1.97
CCDC194A0A1B0GVG4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CCDC194A0A1B0GVG4 AC097639.1-201ENST00000565519 1891 ntBASIC27.32■■□□□ 1.96
CCDC194A0A1B0GVG4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC27.32■■□□□ 1.96
CCDC194A0A1B0GVG4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC194A0A1B0GVG4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC194A0A1B0GVG4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
CCDC194A0A1B0GVG4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC194A0A1B0GVG4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC194A0A1B0GVG4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.32■■□□□ 1.96
CCDC194A0A1B0GVG4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC194A0A1B0GVG4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC194A0A1B0GVG4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC194A0A1B0GVG4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
CCDC194A0A1B0GVG4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
CCDC194A0A1B0GVG4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC194A0A1B0GVG4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.3■■□□□ 1.96
CCDC194A0A1B0GVG4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC194A0A1B0GVG4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC194A0A1B0GVG4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.28■■□□□ 1.96
CCDC194A0A1B0GVG4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC194A0A1B0GVG4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
CCDC194A0A1B0GVG4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC27.27■■□□□ 1.96
CCDC194A0A1B0GVG4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC194A0A1B0GVG4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.27■■□□□ 1.96
CCDC194A0A1B0GVG4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC27.27■■□□□ 1.96
CCDC194A0A1B0GVG4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC27.27■■□□□ 1.96
CCDC194A0A1B0GVG4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC194A0A1B0GVG4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC194A0A1B0GVG4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC194A0A1B0GVG4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC27.26■■□□□ 1.95
CCDC194A0A1B0GVG4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC27.26■■□□□ 1.95
CCDC194A0A1B0GVG4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC194A0A1B0GVG4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC194A0A1B0GVG4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC194A0A1B0GVG4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC194A0A1B0GVG4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC194A0A1B0GVG4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.25■■□□□ 1.95
CCDC194A0A1B0GVG4 AC004987.1-201ENST00000428627 508 ntBASIC27.25■■□□□ 1.95
CCDC194A0A1B0GVG4 DUX4L18-201ENST00000553347 1267 ntBASIC27.25■■□□□ 1.95
CCDC194A0A1B0GVG4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC27.25■■□□□ 1.95
CCDC194A0A1B0GVG4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC194A0A1B0GVG4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC194A0A1B0GVG4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC194A0A1B0GVG4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC194A0A1B0GVG4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
CCDC194A0A1B0GVG4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC194A0A1B0GVG4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC194A0A1B0GVG4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC194A0A1B0GVG4 ATP5G2P3-201ENST00000429083 425 ntBASIC27.24■■□□□ 1.95
CCDC194A0A1B0GVG4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
CCDC194A0A1B0GVG4 RPS2P7-201ENST00000447334 885 ntBASIC27.24■■□□□ 1.95
CCDC194A0A1B0GVG4 AC012354.3-201ENST00000623734 483 ntBASIC27.24■■□□□ 1.95
CCDC194A0A1B0GVG4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC194A0A1B0GVG4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC27.23■■□□□ 1.95
CCDC194A0A1B0GVG4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC194A0A1B0GVG4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC194A0A1B0GVG4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC194A0A1B0GVG4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CCDC194A0A1B0GVG4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
CCDC194A0A1B0GVG4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CCDC194A0A1B0GVG4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC194A0A1B0GVG4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC27.21■■□□□ 1.95
CCDC194A0A1B0GVG4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.21■■□□□ 1.95
CCDC194A0A1B0GVG4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
CCDC194A0A1B0GVG4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
CCDC194A0A1B0GVG4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC194A0A1B0GVG4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC194A0A1B0GVG4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC194A0A1B0GVG4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
CCDC194A0A1B0GVG4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
CCDC194A0A1B0GVG4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.2■■□□□ 1.94
CCDC194A0A1B0GVG4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
CCDC194A0A1B0GVG4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.2■■□□□ 1.94
CCDC194A0A1B0GVG4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC27.2■■□□□ 1.94
CCDC194A0A1B0GVG4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CCDC194A0A1B0GVG4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.2■■□□□ 1.94
CCDC194A0A1B0GVG4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC27.19■■□□□ 1.94
CCDC194A0A1B0GVG4 TSPY13P-201ENST00000338964 914 ntBASIC27.19■■□□□ 1.94
CCDC194A0A1B0GVG4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC27.19■■□□□ 1.94
CCDC194A0A1B0GVG4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC27.19■■□□□ 1.94
CCDC194A0A1B0GVG4 AC087393.1-201ENST00000582896 145 ntBASIC27.19■■□□□ 1.94
CCDC194A0A1B0GVG4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC27.19■■□□□ 1.94
CCDC194A0A1B0GVG4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC27.19■■□□□ 1.94
CCDC194A0A1B0GVG4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CCDC194A0A1B0GVG4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CCDC194A0A1B0GVG4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms