Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 AC009299.2-201ENST00000482477 511 ntBASIC19.46■□□□□ 0.71
CENPVL3A0A0U1RRI6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CENPVL3A0A0U1RRI6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CENPVL3A0A0U1RRI6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CENPVL3A0A0U1RRI6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CENPVL3A0A0U1RRI6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CENPVL3A0A0U1RRI6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CENPVL3A0A0U1RRI6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.45■□□□□ 0.7
CENPVL3A0A0U1RRI6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CENPVL3A0A0U1RRI6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.45■□□□□ 0.7
CENPVL3A0A0U1RRI6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CENPVL3A0A0U1RRI6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.45■□□□□ 0.7
CENPVL3A0A0U1RRI6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CENPVL3A0A0U1RRI6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CENPVL3A0A0U1RRI6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.44■□□□□ 0.7
CENPVL3A0A0U1RRI6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CENPVL3A0A0U1RRI6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CENPVL3A0A0U1RRI6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CENPVL3A0A0U1RRI6 AC022616.5-201ENST00000518796 181 ntBASIC19.44■□□□□ 0.7
CENPVL3A0A0U1RRI6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CENPVL3A0A0U1RRI6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CENPVL3A0A0U1RRI6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPVL3A0A0U1RRI6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CENPVL3A0A0U1RRI6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPVL3A0A0U1RRI6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPVL3A0A0U1RRI6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPVL3A0A0U1RRI6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPVL3A0A0U1RRI6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CENPVL3A0A0U1RRI6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.43■□□□□ 0.7
CENPVL3A0A0U1RRI6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPVL3A0A0U1RRI6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CENPVL3A0A0U1RRI6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPVL3A0A0U1RRI6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPVL3A0A0U1RRI6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CENPVL3A0A0U1RRI6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.42■□□□□ 0.7
CENPVL3A0A0U1RRI6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.42■□□□□ 0.7
CENPVL3A0A0U1RRI6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CENPVL3A0A0U1RRI6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CENPVL3A0A0U1RRI6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CENPVL3A0A0U1RRI6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CENPVL3A0A0U1RRI6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CENPVL3A0A0U1RRI6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CENPVL3A0A0U1RRI6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CENPVL3A0A0U1RRI6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CENPVL3A0A0U1RRI6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CENPVL3A0A0U1RRI6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CENPVL3A0A0U1RRI6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CENPVL3A0A0U1RRI6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CENPVL3A0A0U1RRI6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.4■□□□□ 0.7
CENPVL3A0A0U1RRI6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.4■□□□□ 0.7
CENPVL3A0A0U1RRI6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CENPVL3A0A0U1RRI6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CENPVL3A0A0U1RRI6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CENPVL3A0A0U1RRI6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.4■□□□□ 0.7
CENPVL3A0A0U1RRI6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.4■□□□□ 0.7
CENPVL3A0A0U1RRI6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CENPVL3A0A0U1RRI6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.39■□□□□ 0.69
CENPVL3A0A0U1RRI6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.39■□□□□ 0.69
CENPVL3A0A0U1RRI6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.39■□□□□ 0.69
CENPVL3A0A0U1RRI6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPVL3A0A0U1RRI6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPVL3A0A0U1RRI6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPVL3A0A0U1RRI6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPVL3A0A0U1RRI6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.38■□□□□ 0.69
CENPVL3A0A0U1RRI6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPVL3A0A0U1RRI6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
CENPVL3A0A0U1RRI6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.38■□□□□ 0.69
CENPVL3A0A0U1RRI6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPVL3A0A0U1RRI6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.38■□□□□ 0.69
CENPVL3A0A0U1RRI6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CENPVL3A0A0U1RRI6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CENPVL3A0A0U1RRI6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CENPVL3A0A0U1RRI6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CENPVL3A0A0U1RRI6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.37■□□□□ 0.69
CENPVL3A0A0U1RRI6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CENPVL3A0A0U1RRI6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CENPVL3A0A0U1RRI6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CENPVL3A0A0U1RRI6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
CENPVL3A0A0U1RRI6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CENPVL3A0A0U1RRI6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CENPVL3A0A0U1RRI6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CENPVL3A0A0U1RRI6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CENPVL3A0A0U1RRI6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CENPVL3A0A0U1RRI6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CENPVL3A0A0U1RRI6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CENPVL3A0A0U1RRI6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.36■□□□□ 0.69
CENPVL3A0A0U1RRI6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
CENPVL3A0A0U1RRI6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.35■□□□□ 0.69
CENPVL3A0A0U1RRI6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.35■□□□□ 0.69
CENPVL3A0A0U1RRI6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.35■□□□□ 0.69
CENPVL3A0A0U1RRI6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CENPVL3A0A0U1RRI6 KRT18P24-201ENST00000344739 1156 ntBASIC19.35■□□□□ 0.69
CENPVL3A0A0U1RRI6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CENPVL3A0A0U1RRI6 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.35■□□□□ 0.69
CENPVL3A0A0U1RRI6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.35■□□□□ 0.69
CENPVL3A0A0U1RRI6 ERN1-208ENST00000606895 2068 ntBASIC19.35■□□□□ 0.69
CENPVL3A0A0U1RRI6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.35■□□□□ 0.69
CENPVL3A0A0U1RRI6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CENPVL3A0A0U1RRI6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CENPVL3A0A0U1RRI6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms