Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.18■■□□□ 1.14
TRBV11-1A0A0K0K1C0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRBV11-1A0A0K0K1C0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRBV11-1A0A0K0K1C0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.18■■□□□ 1.14
TRBV11-1A0A0K0K1C0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRBV11-1A0A0K0K1C0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.18■■□□□ 1.14
TRBV11-1A0A0K0K1C0 LONRF2P2-201ENST00000439212 571 ntBASIC22.18■■□□□ 1.14
TRBV11-1A0A0K0K1C0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRBV11-1A0A0K0K1C0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.18■■□□□ 1.14
TRBV11-1A0A0K0K1C0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.18■■□□□ 1.14
TRBV11-1A0A0K0K1C0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRBV11-1A0A0K0K1C0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
TRBV11-1A0A0K0K1C0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
TRBV11-1A0A0K0K1C0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRBV11-1A0A0K0K1C0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.17■■□□□ 1.14
TRBV11-1A0A0K0K1C0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRBV11-1A0A0K0K1C0 YBX1P4-201ENST00000392794 808 ntBASIC22.17■■□□□ 1.14
TRBV11-1A0A0K0K1C0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.17■■□□□ 1.14
TRBV11-1A0A0K0K1C0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRBV11-1A0A0K0K1C0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.17■■□□□ 1.14
TRBV11-1A0A0K0K1C0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRBV11-1A0A0K0K1C0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRBV11-1A0A0K0K1C0 AC092803.2-201ENST00000564287 1899 ntBASIC22.16■■□□□ 1.14
TRBV11-1A0A0K0K1C0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.16■■□□□ 1.14
TRBV11-1A0A0K0K1C0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.16■■□□□ 1.14
TRBV11-1A0A0K0K1C0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRBV11-1A0A0K0K1C0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRBV11-1A0A0K0K1C0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.15■■□□□ 1.14
TRBV11-1A0A0K0K1C0 AC019171.1-201ENST00000601251 1056 ntBASIC22.15■■□□□ 1.14
TRBV11-1A0A0K0K1C0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRBV11-1A0A0K0K1C0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRBV11-1A0A0K0K1C0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.14■■□□□ 1.13
TRBV11-1A0A0K0K1C0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRBV11-1A0A0K0K1C0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.14■■□□□ 1.13
TRBV11-1A0A0K0K1C0 AC103834.1-201ENST00000520383 144 ntBASIC22.14■■□□□ 1.13
TRBV11-1A0A0K0K1C0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.14■■□□□ 1.13
TRBV11-1A0A0K0K1C0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.14■■□□□ 1.13
TRBV11-1A0A0K0K1C0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRBV11-1A0A0K0K1C0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.14■■□□□ 1.13
TRBV11-1A0A0K0K1C0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRBV11-1A0A0K0K1C0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
TRBV11-1A0A0K0K1C0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.13■■□□□ 1.13
TRBV11-1A0A0K0K1C0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRBV11-1A0A0K0K1C0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
TRBV11-1A0A0K0K1C0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.13■■□□□ 1.13
TRBV11-1A0A0K0K1C0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
TRBV11-1A0A0K0K1C0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRBV11-1A0A0K0K1C0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRBV11-1A0A0K0K1C0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRBV11-1A0A0K0K1C0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRBV11-1A0A0K0K1C0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRBV11-1A0A0K0K1C0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRBV11-1A0A0K0K1C0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRBV11-1A0A0K0K1C0 AC010501.1-201ENST00000606270 1962 ntBASIC22.12■■□□□ 1.13
TRBV11-1A0A0K0K1C0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.12■■□□□ 1.13
TRBV11-1A0A0K0K1C0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.12■■□□□ 1.13
TRBV11-1A0A0K0K1C0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TRBV11-1A0A0K0K1C0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRBV11-1A0A0K0K1C0 MIR4508-201ENST00000584178 70 ntBASIC22.12■■□□□ 1.13
TRBV11-1A0A0K0K1C0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TRBV11-1A0A0K0K1C0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.12■■□□□ 1.13
TRBV11-1A0A0K0K1C0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRBV11-1A0A0K0K1C0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
TRBV11-1A0A0K0K1C0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
TRBV11-1A0A0K0K1C0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRBV11-1A0A0K0K1C0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRBV11-1A0A0K0K1C0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
TRBV11-1A0A0K0K1C0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
TRBV11-1A0A0K0K1C0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
TRBV11-1A0A0K0K1C0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRBV11-1A0A0K0K1C0 AC096887.2-201ENST00000623443 1957 ntBASIC22.11■■□□□ 1.13
TRBV11-1A0A0K0K1C0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRBV11-1A0A0K0K1C0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
TRBV11-1A0A0K0K1C0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRBV11-1A0A0K0K1C0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRBV11-1A0A0K0K1C0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.1■■□□□ 1.13
TRBV11-1A0A0K0K1C0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TRBV11-1A0A0K0K1C0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.1■■□□□ 1.13
TRBV11-1A0A0K0K1C0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRBV11-1A0A0K0K1C0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.09■■□□□ 1.13
TRBV11-1A0A0K0K1C0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.09■■□□□ 1.13
TRBV11-1A0A0K0K1C0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRBV11-1A0A0K0K1C0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRBV11-1A0A0K0K1C0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRBV11-1A0A0K0K1C0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TRBV11-1A0A0K0K1C0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.08■■□□□ 1.13
TRBV11-1A0A0K0K1C0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
TRBV11-1A0A0K0K1C0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
TRBV11-1A0A0K0K1C0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
TRBV11-1A0A0K0K1C0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
TRBV11-1A0A0K0K1C0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.08■■□□□ 1.12
TRBV11-1A0A0K0K1C0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TRBV11-1A0A0K0K1C0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRBV11-1A0A0K0K1C0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRBV11-1A0A0K0K1C0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRBV11-1A0A0K0K1C0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRBV11-1A0A0K0K1C0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.07■■□□□ 1.12
TRBV11-1A0A0K0K1C0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
TRBV11-1A0A0K0K1C0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRBV11-1A0A0K0K1C0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms