Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
CCDC163A0A0D9SF12 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24■■□□□ 1.43
CCDC163A0A0D9SF12 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC163A0A0D9SF12 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC163A0A0D9SF12 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC163A0A0D9SF12 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC163A0A0D9SF12 AC005837.3-201ENST00000612163 286 ntBASIC23.99■■□□□ 1.43
CCDC163A0A0D9SF12 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.99■■□□□ 1.43
CCDC163A0A0D9SF12 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC163A0A0D9SF12 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC163A0A0D9SF12 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
CCDC163A0A0D9SF12 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC163A0A0D9SF12 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC163A0A0D9SF12 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC163A0A0D9SF12 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC163A0A0D9SF12 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC163A0A0D9SF12 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
CCDC163A0A0D9SF12 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC163A0A0D9SF12 MTDHP2-201ENST00000601468 714 ntBASIC23.98■■□□□ 1.43
CCDC163A0A0D9SF12 AC011551.1-201ENST00000614101 683 ntBASIC23.98■■□□□ 1.43
CCDC163A0A0D9SF12 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.98■■□□□ 1.43
CCDC163A0A0D9SF12 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC163A0A0D9SF12 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC163A0A0D9SF12 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC163A0A0D9SF12 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.97■■□□□ 1.43
CCDC163A0A0D9SF12 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
CCDC163A0A0D9SF12 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.97■■□□□ 1.43
CCDC163A0A0D9SF12 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.97■■□□□ 1.43
CCDC163A0A0D9SF12 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC163A0A0D9SF12 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.97■■□□□ 1.43
CCDC163A0A0D9SF12 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CCDC163A0A0D9SF12 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC163A0A0D9SF12 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC163A0A0D9SF12 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.96■■□□□ 1.43
CCDC163A0A0D9SF12 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.96■■□□□ 1.43
CCDC163A0A0D9SF12 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
CCDC163A0A0D9SF12 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.96■■□□□ 1.43
CCDC163A0A0D9SF12 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.96■■□□□ 1.43
CCDC163A0A0D9SF12 BX255925.1-201ENST00000566954 1854 ntBASIC23.96■■□□□ 1.43
CCDC163A0A0D9SF12 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
CCDC163A0A0D9SF12 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC163A0A0D9SF12 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC163A0A0D9SF12 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC163A0A0D9SF12 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.95■■□□□ 1.42
CCDC163A0A0D9SF12 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
CCDC163A0A0D9SF12 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC163A0A0D9SF12 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC163A0A0D9SF12 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.94■■□□□ 1.42
CCDC163A0A0D9SF12 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.94■■□□□ 1.42
CCDC163A0A0D9SF12 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC163A0A0D9SF12 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC163A0A0D9SF12 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.94■■□□□ 1.42
CCDC163A0A0D9SF12 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC163A0A0D9SF12 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.94■■□□□ 1.42
CCDC163A0A0D9SF12 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC163A0A0D9SF12 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CCDC163A0A0D9SF12 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
CCDC163A0A0D9SF12 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.93■■□□□ 1.42
CCDC163A0A0D9SF12 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.93■■□□□ 1.42
CCDC163A0A0D9SF12 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC163A0A0D9SF12 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CCDC163A0A0D9SF12 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
CCDC163A0A0D9SF12 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC163A0A0D9SF12 AC096631.2-201ENST00000436136 790 ntBASIC23.92■■□□□ 1.42
CCDC163A0A0D9SF12 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.92■■□□□ 1.42
CCDC163A0A0D9SF12 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.92■■□□□ 1.42
CCDC163A0A0D9SF12 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.92■■□□□ 1.42
CCDC163A0A0D9SF12 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC163A0A0D9SF12 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC163A0A0D9SF12 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
CCDC163A0A0D9SF12 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC163A0A0D9SF12 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.91■■□□□ 1.42
CCDC163A0A0D9SF12 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.91■■□□□ 1.42
CCDC163A0A0D9SF12 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.91■■□□□ 1.42
CCDC163A0A0D9SF12 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC163A0A0D9SF12 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.9■■□□□ 1.42
CCDC163A0A0D9SF12 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.9■■□□□ 1.42
CCDC163A0A0D9SF12 MIR4466-201ENST00000606121 54 ntBASIC23.9■■□□□ 1.42
CCDC163A0A0D9SF12 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC163A0A0D9SF12 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.89■■□□□ 1.41
CCDC163A0A0D9SF12 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC163A0A0D9SF12 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
CCDC163A0A0D9SF12 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC163A0A0D9SF12 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC163A0A0D9SF12 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
CCDC163A0A0D9SF12 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC163A0A0D9SF12 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.88■■□□□ 1.41
CCDC163A0A0D9SF12 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC163A0A0D9SF12 AC142472.1-201ENST00000612013 1741 ntBASIC23.87■■□□□ 1.41
CCDC163A0A0D9SF12 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC163A0A0D9SF12 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.87■■□□□ 1.41
CCDC163A0A0D9SF12 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.87■■□□□ 1.41
CCDC163A0A0D9SF12 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC163A0A0D9SF12 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC163A0A0D9SF12 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC163A0A0D9SF12 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC163A0A0D9SF12 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.86■■□□□ 1.41
CCDC163A0A0D9SF12 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC163A0A0D9SF12 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.86■■□□□ 1.41
CCDC163A0A0D9SF12 AL512631.2-201ENST00000604634 923 ntBASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms