Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV21A0A0B4J279 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
TRAV21A0A0B4J279 AC097639.1-201ENST00000565519 1891 ntBASIC17.67■□□□□ 0.42
TRAV21A0A0B4J279 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV21A0A0B4J279 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV21A0A0B4J279 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV21A0A0B4J279 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV21A0A0B4J279 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRAV21A0A0B4J279 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV21A0A0B4J279 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV21A0A0B4J279 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV21A0A0B4J279 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV21A0A0B4J279 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRAV21A0A0B4J279 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV21A0A0B4J279 AP003733.4-201ENST00000623785 1697 ntBASIC17.65■□□□□ 0.42
TRAV21A0A0B4J279 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV21A0A0B4J279 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV21A0A0B4J279 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV21A0A0B4J279 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRAV21A0A0B4J279 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV21A0A0B4J279 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV21A0A0B4J279 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAV21A0A0B4J279 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRAV21A0A0B4J279 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV21A0A0B4J279 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV21A0A0B4J279 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV21A0A0B4J279 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV21A0A0B4J279 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV21A0A0B4J279 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV21A0A0B4J279 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV21A0A0B4J279 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV21A0A0B4J279 CR559946.2-201ENST00000623684 991 ntBASIC17.64■□□□□ 0.41
TRAV21A0A0B4J279 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRAV21A0A0B4J279 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV21A0A0B4J279 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV21A0A0B4J279 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV21A0A0B4J279 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV21A0A0B4J279 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.63■□□□□ 0.41
TRAV21A0A0B4J279 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV21A0A0B4J279 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV21A0A0B4J279 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV21A0A0B4J279 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV21A0A0B4J279 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV21A0A0B4J279 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV21A0A0B4J279 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRAV21A0A0B4J279 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV21A0A0B4J279 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV21A0A0B4J279 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV21A0A0B4J279 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV21A0A0B4J279 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV21A0A0B4J279 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV21A0A0B4J279 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV21A0A0B4J279 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.62■□□□□ 0.41
TRAV21A0A0B4J279 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV21A0A0B4J279 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV21A0A0B4J279 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV21A0A0B4J279 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRAV21A0A0B4J279 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV21A0A0B4J279 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRAV21A0A0B4J279 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV21A0A0B4J279 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV21A0A0B4J279 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.61■□□□□ 0.41
TRAV21A0A0B4J279 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV21A0A0B4J279 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV21A0A0B4J279 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV21A0A0B4J279 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV21A0A0B4J279 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV21A0A0B4J279 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV21A0A0B4J279 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRAV21A0A0B4J279 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV21A0A0B4J279 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV21A0A0B4J279 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV21A0A0B4J279 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV21A0A0B4J279 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.59■□□□□ 0.41
TRAV21A0A0B4J279 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV21A0A0B4J279 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV21A0A0B4J279 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV21A0A0B4J279 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.41
TRAV21A0A0B4J279 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV21A0A0B4J279 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV21A0A0B4J279 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV21A0A0B4J279 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV21A0A0B4J279 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV21A0A0B4J279 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV21A0A0B4J279 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAV21A0A0B4J279 MIR3648-2-201ENST00000581792 180 ntBASIC17.57■□□□□ 0.4
TRAV21A0A0B4J279 MIR3648-1-201ENST00000615959 180 ntBASIC17.57■□□□□ 0.4
TRAV21A0A0B4J279 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV21A0A0B4J279 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRAV21A0A0B4J279 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV21A0A0B4J279 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV21A0A0B4J279 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV21A0A0B4J279 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV21A0A0B4J279 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV21A0A0B4J279 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRAV21A0A0B4J279 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV21A0A0B4J279 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV21A0A0B4J279 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV21A0A0B4J279 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV21A0A0B4J279 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms