Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV12-3A0A0B4J271 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV12-3A0A0B4J271 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV12-3A0A0B4J271 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
TRAV12-3A0A0B4J271 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.65■□□□□ 0.42
TRAV12-3A0A0B4J271 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV12-3A0A0B4J271 SMPD5-203ENST00000639008 1464 ntBASIC17.65■□□□□ 0.42
TRAV12-3A0A0B4J271 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.65■□□□□ 0.42
TRAV12-3A0A0B4J271 AC022413.1-201ENST00000624602 984 ntBASIC17.65■□□□□ 0.42
TRAV12-3A0A0B4J271 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV12-3A0A0B4J271 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV12-3A0A0B4J271 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TRAV12-3A0A0B4J271 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV12-3A0A0B4J271 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV12-3A0A0B4J271 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV12-3A0A0B4J271 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAV12-3A0A0B4J271 MIR3960-201ENST00000583311 91 ntBASIC17.64■□□□□ 0.41
TRAV12-3A0A0B4J271 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV12-3A0A0B4J271 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV12-3A0A0B4J271 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV12-3A0A0B4J271 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV12-3A0A0B4J271 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV12-3A0A0B4J271 AC022211.4-201ENST00000625094 2161 ntBASIC17.63■□□□□ 0.41
TRAV12-3A0A0B4J271 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV12-3A0A0B4J271 AC025884.2-201ENST00000553429 711 ntBASIC17.63■□□□□ 0.41
TRAV12-3A0A0B4J271 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV12-3A0A0B4J271 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV12-3A0A0B4J271 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV12-3A0A0B4J271 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV12-3A0A0B4J271 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV12-3A0A0B4J271 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV12-3A0A0B4J271 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV12-3A0A0B4J271 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV12-3A0A0B4J271 AC142381.3-201ENST00000568208 1670 ntBASIC17.62■□□□□ 0.41
TRAV12-3A0A0B4J271 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TRAV12-3A0A0B4J271 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV12-3A0A0B4J271 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV12-3A0A0B4J271 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV12-3A0A0B4J271 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV12-3A0A0B4J271 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV12-3A0A0B4J271 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV12-3A0A0B4J271 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
TRAV12-3A0A0B4J271 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV12-3A0A0B4J271 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TRAV12-3A0A0B4J271 AC092296.2-201ENST00000589470 999 ntBASIC17.61■□□□□ 0.41
TRAV12-3A0A0B4J271 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAV12-3A0A0B4J271 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAV12-3A0A0B4J271 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV12-3A0A0B4J271 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRAV12-3A0A0B4J271 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV12-3A0A0B4J271 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TRAV12-3A0A0B4J271 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV12-3A0A0B4J271 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.6■□□□□ 0.41
TRAV12-3A0A0B4J271 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.6■□□□□ 0.41
TRAV12-3A0A0B4J271 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV12-3A0A0B4J271 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV12-3A0A0B4J271 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV12-3A0A0B4J271 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV12-3A0A0B4J271 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV12-3A0A0B4J271 AC097639.1-201ENST00000565519 1891 ntBASIC17.59■□□□□ 0.41
TRAV12-3A0A0B4J271 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV12-3A0A0B4J271 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV12-3A0A0B4J271 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRAV12-3A0A0B4J271 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV12-3A0A0B4J271 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV12-3A0A0B4J271 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRAV12-3A0A0B4J271 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TRAV12-3A0A0B4J271 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TRAV12-3A0A0B4J271 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV12-3A0A0B4J271 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV12-3A0A0B4J271 ECEL1P2-201ENST00000461596 1295 ntBASIC17.58■□□□□ 0.4
TRAV12-3A0A0B4J271 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAV12-3A0A0B4J271 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV12-3A0A0B4J271 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV12-3A0A0B4J271 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV12-3A0A0B4J271 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV12-3A0A0B4J271 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV12-3A0A0B4J271 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TRAV12-3A0A0B4J271 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV12-3A0A0B4J271 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV12-3A0A0B4J271 AC138932.3-201ENST00000567634 1902 ntBASIC17.57■□□□□ 0.4
TRAV12-3A0A0B4J271 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV12-3A0A0B4J271 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV12-3A0A0B4J271 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.57■□□□□ 0.4
TRAV12-3A0A0B4J271 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRAV12-3A0A0B4J271 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRAV12-3A0A0B4J271 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV12-3A0A0B4J271 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV12-3A0A0B4J271 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV12-3A0A0B4J271 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV12-3A0A0B4J271 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV12-3A0A0B4J271 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRAV12-3A0A0B4J271 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV12-3A0A0B4J271 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV12-3A0A0B4J271 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
TRAV12-3A0A0B4J271 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV12-3A0A0B4J271 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV12-3A0A0B4J271 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV12-3A0A0B4J271 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV12-3A0A0B4J271 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms