Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV5A0A0B4J249 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV5A0A0B4J249 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV5A0A0B4J249 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV5A0A0B4J249 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV5A0A0B4J249 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV5A0A0B4J249 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV5A0A0B4J249 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV5A0A0B4J249 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV5A0A0B4J249 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV5A0A0B4J249 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV5A0A0B4J249 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV5A0A0B4J249 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV5A0A0B4J249 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV5A0A0B4J249 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV5A0A0B4J249 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV5A0A0B4J249 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV5A0A0B4J249 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV5A0A0B4J249 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV5A0A0B4J249 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV5A0A0B4J249 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV5A0A0B4J249 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV5A0A0B4J249 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV5A0A0B4J249 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV5A0A0B4J249 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
TRAV5A0A0B4J249 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV5A0A0B4J249 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV5A0A0B4J249 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV5A0A0B4J249 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV5A0A0B4J249 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.45■□□□□ 0.54
TRAV5A0A0B4J249 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV5A0A0B4J249 AP003733.4-201ENST00000623785 1697 ntBASIC18.45■□□□□ 0.54
TRAV5A0A0B4J249 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV5A0A0B4J249 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV5A0A0B4J249 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.45■□□□□ 0.54
TRAV5A0A0B4J249 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV5A0A0B4J249 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV5A0A0B4J249 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV5A0A0B4J249 SLC6A10P-202ENST00000431994 2058 ntBASIC18.45■□□□□ 0.54
TRAV5A0A0B4J249 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV5A0A0B4J249 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRAV5A0A0B4J249 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV5A0A0B4J249 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV5A0A0B4J249 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV5A0A0B4J249 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV5A0A0B4J249 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.44■□□□□ 0.54
TRAV5A0A0B4J249 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.44■□□□□ 0.54
TRAV5A0A0B4J249 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV5A0A0B4J249 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV5A0A0B4J249 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV5A0A0B4J249 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRAV5A0A0B4J249 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV5A0A0B4J249 AC097639.1-201ENST00000565519 1891 ntBASIC18.43■□□□□ 0.54
TRAV5A0A0B4J249 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAV5A0A0B4J249 AC133561.1-201ENST00000568600 2415 ntBASIC18.43■□□□□ 0.54
TRAV5A0A0B4J249 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV5A0A0B4J249 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV5A0A0B4J249 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV5A0A0B4J249 DUX4L11-201ENST00000611504 1267 ntBASIC18.43■□□□□ 0.54
TRAV5A0A0B4J249 DUX4L12-201ENST00000614593 1267 ntBASIC18.43■□□□□ 0.54
TRAV5A0A0B4J249 DUX4L14-201ENST00000621227 1267 ntBASIC18.43■□□□□ 0.54
TRAV5A0A0B4J249 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV5A0A0B4J249 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRAV5A0A0B4J249 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV5A0A0B4J249 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV5A0A0B4J249 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV5A0A0B4J249 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV5A0A0B4J249 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV5A0A0B4J249 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV5A0A0B4J249 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
TRAV5A0A0B4J249 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV5A0A0B4J249 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV5A0A0B4J249 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV5A0A0B4J249 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV5A0A0B4J249 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV5A0A0B4J249 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV5A0A0B4J249 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV5A0A0B4J249 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV5A0A0B4J249 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV5A0A0B4J249 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV5A0A0B4J249 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV5A0A0B4J249 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
TRAV5A0A0B4J249 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRAV5A0A0B4J249 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV5A0A0B4J249 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.41■□□□□ 0.54
TRAV5A0A0B4J249 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV5A0A0B4J249 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV5A0A0B4J249 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV5A0A0B4J249 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV5A0A0B4J249 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRAV5A0A0B4J249 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV5A0A0B4J249 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TRAV5A0A0B4J249 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRAV5A0A0B4J249 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV5A0A0B4J249 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV5A0A0B4J249 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV5A0A0B4J249 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV5A0A0B4J249 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV5A0A0B4J249 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV5A0A0B4J249 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms