Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.36■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.36■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.36■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 KRT18P10-201ENST00000388836 1287 ntBASIC23.35■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.35■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 AC019171.1-201ENST00000601251 1056 ntBASIC23.34■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.34■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.33■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 AC009299.2-201ENST00000482477 511 ntBASIC23.32■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 ERN1-208ENST00000606895 2068 ntBASIC23.31■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 AL031848.2-201ENST00000607670 837 ntBASIC23.31■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.3■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.3■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.29■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.29■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.29■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.29■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.28■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.28■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.28■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.28■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.27■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRBV23OR9-2A0A075B6M9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.26■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.26■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.24■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.23■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.23■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms