Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 RCC2P3-201ENST00000418112 1537 ntBASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 HLA-J-202ENST00000469281 1241 ntBASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 CCDC92B-201ENST00000575506 885 ntBASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 AC136469.2-201ENST00000623944 1028 ntBASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 NUTM2HP-201ENST00000442076 2498 ntBASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 CICP11-201ENST00000434745 2827 ntBASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 AC008677.1-201ENST00000519230 1561 ntBASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 AC009949.1-201ENST00000623048 1830 ntBASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 AC015909.5-201ENST00000624336 2266 ntBASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 MIR149-201ENST00000384879 89 ntBASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC8.59□□□□□ -1.03
LINC01558Q9Y6Z2 GPX1-201ENST00000419349 1106 ntBASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms