Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 AC132872.4-202ENST00000622924 2756 ntBASIC19.07■□□□□ 0.64
CLIC4Q9Y696 AC129492.6-201ENST00000611383 1305 ntBASIC19.07■□□□□ 0.64
CLIC4Q9Y696 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 KRT18P67-201ENST00000432816 1264 ntBASIC19.07■□□□□ 0.64
CLIC4Q9Y696 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 MIR1199-201ENST00000621445 119 ntBASIC19.07■□□□□ 0.64
CLIC4Q9Y696 FAM215A-202ENST00000632077 792 ntBASIC19.07■□□□□ 0.64
CLIC4Q9Y696 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 AC007950.2-201ENST00000615045 2347 ntBASIC19.07■□□□□ 0.64
CLIC4Q9Y696 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC4Q9Y696 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 AC087641.1-201ENST00000557561 1021 ntBASIC19.06■□□□□ 0.64
CLIC4Q9Y696 RN7SL510P-201ENST00000581311 263 ntBASIC19.06■□□□□ 0.64
CLIC4Q9Y696 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 AL031008.1-201ENST00000619963 541 ntBASIC19.06■□□□□ 0.64
CLIC4Q9Y696 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 AL596087.1-201ENST00000400979 1969 ntBASIC19.06■□□□□ 0.64
CLIC4Q9Y696 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 GPAA1P2-202ENST00000606848 1787 ntBASIC19.06■□□□□ 0.64
CLIC4Q9Y696 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CLIC4Q9Y696 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 AC108073.2-201ENST00000464002 357 ntBASIC19.05■□□□□ 0.64
CLIC4Q9Y696 AF186996.4-201ENST00000467186 377 ntBASIC19.05■□□□□ 0.64
CLIC4Q9Y696 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 AC005412.3-201ENST00000580309 715 ntBASIC19.05■□□□□ 0.64
CLIC4Q9Y696 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.05■□□□□ 0.64
CLIC4Q9Y696 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 AC117500.6-201ENST00000624871 588 ntBASIC19.05■□□□□ 0.64
CLIC4Q9Y696 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC4Q9Y696 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms