Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 AC079776.1-201ENST00000401540 1152 ntBASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 AC022494.1-201ENST00000466044 728 ntBASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 AC007431.3-201ENST00000623221 587 ntBASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC2Q9Y5Z7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 AL023806.1-201ENST00000603994 1649 ntBASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 ACA64.2-201ENST00000459014 129 ntBASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 KRT8P39-201ENST00000396270 1433 ntBASIC17.3■□□□□ 0.36
HCFC2Q9Y5Z7 PP12613-201ENST00000424958 2230 ntBASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 MIR1909-201ENST00000411312 80 ntBASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 AC114501.2-201ENST00000439631 535 ntBASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 MIR6799-201ENST00000620297 69 ntBASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 SNX33P1-201ENST00000592116 1762 ntBASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC2Q9Y5Z7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms