Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB1Q9Y5F3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB1Q9Y5F3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.71■□□□□ 0.26
PCDHB1Q9Y5F3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.26
PCDHB1Q9Y5F3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
PCDHB1Q9Y5F3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 AC096734.2-201ENST00000562054 433 ntBASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 OR7E47P-204ENST00000575924 449 ntBASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 AC084018.2-201ENST00000613093 2607 ntBASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 AC025580.3-201ENST00000617932 1424 ntBASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHB1Q9Y5F3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 HLA-A-202ENST00000376806 1854 ntBASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 SPCS2P1-201ENST00000561636 679 ntBASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 AC005412.3-201ENST00000580309 715 ntBASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHB1Q9Y5F3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms