Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HHLA3Q9XRX5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 KLF4P1-201ENST00000412782 1185 ntBASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
HHLA3Q9XRX5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 AC009336.1-201ENST00000608941 1553 ntBASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 ABCD1P5-201ENST00000445663 754 ntBASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 AC092053.1-201ENST00000605787 1936 ntBASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HHLA3Q9XRX5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms