Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 AL355306.1-201ENST00000415580 579 ntBASIC19.85■□□□□ 0.77
HPS5Q9UPZ3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.85■□□□□ 0.77
HPS5Q9UPZ3 SPDYE11-202ENST00000450699 704 ntBASIC19.85■□□□□ 0.77
HPS5Q9UPZ3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.85■□□□□ 0.77
HPS5Q9UPZ3 SPDYE9P-201ENST00000570642 692 ntBASIC19.85■□□□□ 0.77
HPS5Q9UPZ3 SPDYE10P-202ENST00000612005 668 ntBASIC19.85■□□□□ 0.77
HPS5Q9UPZ3 SPDYE8P-202ENST00000612377 668 ntBASIC19.85■□□□□ 0.77
HPS5Q9UPZ3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS5Q9UPZ3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS5Q9UPZ3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS5Q9UPZ3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS5Q9UPZ3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.85■□□□□ 0.77
HPS5Q9UPZ3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS5Q9UPZ3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HPS5Q9UPZ3 KRT8P49-201ENST00000604166 1432 ntBASIC19.85■□□□□ 0.77
HPS5Q9UPZ3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 AC107918.2-201ENST00000530817 355 ntBASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HPS5Q9UPZ3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 AL671277.1-201ENST00000429656 993 ntBASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 FAM86C2P-203ENST00000528684 1004 ntBASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HPS5Q9UPZ3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HPS5Q9UPZ3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
HPS5Q9UPZ3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.83■□□□□ 0.76
HPS5Q9UPZ3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HPS5Q9UPZ3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.83■□□□□ 0.76
HPS5Q9UPZ3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
HPS5Q9UPZ3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
HPS5Q9UPZ3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.82■□□□□ 0.76
HPS5Q9UPZ3 AC002056.1-201ENST00000395613 760 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms